PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g371160.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 475aa MW: 53910.7 Da PI: 8.2324 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.5 | 1.7e-11 | 296 | 342 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g371160.m01 296 KHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 342 699***********************6.....5*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 475 aa Download sequence |
MEEIIPSSSP PQLCQENSVS FQQRLQFIVQ NRPEWWVYSI FWQASKDSND QVALSWAGGH 60 FKSPRDLASK RSNKMVNNKH FVERKKVINN REAESLFHEE MDLDMRRVDH GVGDVTDSEW 120 FYFYSISLTQ SFVAGHVTNN ILGRSFCSGS FVWLAGDHEL QFYECERVKK ARMHGIKSLV 180 CIATPRGVLE LASLDVIKED LGLVHLSKSL FLSDNNRVSK QDSRDDNALV PPLESGMYSG 240 GQKDLTKQGD TKEAAPINIG GSSSDSADNF ISDNTESTRL KKRGRSSSNH EPQLLKHVEA 300 ERQRREKLNH RFYVLRSVVP NVSKMDRSSL LADAVAYINQ LKAKIEELED KIQSQPQNPK 360 RGNVSNADHH HYSQSTSPIV DFHHSNNNNT NRAAAALEVD VKILGSEAVI RVQCPDQEYP 420 YAKLMNALKS LRLQVYHASI SNVKDLMIQN VVVRVPYGFT SDEAMRMGII KKWYN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 280 | 286 | LKKRGRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17880.1 | 6e-66 | bHLH family protein |