PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g371140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 313aa    MW: 34535.7 Da    PI: 8.118
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g371140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.49.3e-12132178455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h e+Er+RR+++N++f  Lr+++P+       K++ ++ L  Av YI++L+
  Pd.00g371140.m01 132 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 178
                       799***********************6.....5*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MHGIQTLVCI ATPCGVLELA SLDVIKEDWG LVHLSKSLFG SDNNRISKQG SPDGNAPVPF  60
PESGMFSGPQ KDFPRQEGDT KEAAPINIGG SSSDSPSDSV GNFASENTER TRLKKRGRST  120
NHGPGRESQL LNHVEAERQR REKLNHRFYV LRSVVPNVSK MDRSSLLADA VAYINQLKSK  180
VEELEAKIQS QPQNPKMGNV SNLDHHSSQS TSSTVDFHHS SSNNNNNNNR GAGVVEVDVK  240
ILGSEAMIRV QCPDQDYPYA KLMNALKSLG LQVYHASISS VKEMMIQDIV ARVPYGFTSE  300
EAMRMGIIKR WYN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113119LKKRGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.12e-45bHLH family protein