PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g371110.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 483aa    MW: 53989.5 Da    PI: 6.9791
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g371110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.4e-11307353455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h e+Er+RR+++N++f  Lr+++P+       K++ ++ L  Av YI++L+
  Pd.00g371110.m01 307 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVSYINQLK 353
                       799***********************6.....5*****************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    
MEEIISSSSP TNFCQENSSI FQKRLQFIFQ NRPEWWLYSI FWQASNDSND QVSLSWAGGD  60
FRINRDLATK RSNKVVNNYN PKFGFNNVER RKVVNKDVED LFPEDMVDLA MVDHGDVTDS  120
ELFYFYSVSL TQTFAAGHAS NNVLGRAFCS GGFVWLAGAH ELQFYECERV KEARMHGIQT  180
LVCIATPCGV LELASLDVIK EDWGLVHLSK SLFGSDNNNK VSQEGSCEGN ALVHLLENGM  240
FSGAQREMTR QGGTKEAAHI NICDSSPDSP SDSVGNFTSE NTANTRSKKK RRSSSTNGAS  300
RASQLLNHVE AERQRREKLN HRFYVLRSVV PNVSKMDRSS LLADAVSYIN QLKAKVEELE  360
AKVQEQPKTP KVSNASSLDH QSSQSTSSIV NHPHSSYNNR SVAPLEVNVK ILGSDAMIRV  420
QCPDQDYPYA KLMNALKALG LQVYHASISS VKELMIQDVV ARVPYGFTSE EAMRVSIIKS  480
WCN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1288292KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.15e-61bHLH family protein