PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g369960.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 487aa MW: 52982.4 Da PI: 6.4261

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g369960.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.2e-11	302	344	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L Pd.00g369960.m01 302 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 344 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MLPRLNGAVW MGDREDRDSA SWNRTTAATT NNSNCGVVES KDELGSLSTF KSMLDVDDWY 60 LPNNSIQSHS DVRDIAFSPS FADPESLLLN PVDSSSSCSP SSSVFNNLDP NQVHYYLPQN 120 STLSSLLNVV PNNPLEHGFD LGCDIGFLDT QASSGSSLMN RGGGVLTGFS GLSSNNQMNA 180 QDLCSNLQFS TTRLPQLLEN SSNFSGFRGF EDTSANALFP NRPKLLRPLD SVPDVGAPPT 240 LFQKRVQKNL ADNGGNLDDF TENTKMDDGA KNGGNSSNAN STVTGGGDHK GKKKGLPAKN 300 LMAERRRRKK LNDRLYMLRS VVPKISKMDR ASILGDAIEY LKELLQKINN LHNELESIPP 360 GSSLTPTGST FHPLTPTPAT LPSRIKEELC PSSLPSPNGQ PARVEVRLRE GRAVNIHMFC 420 GRRPGLLLST MRTLDSLGLD IQQAVISCFN GFAMDVFRAE QCKEGQDVHP DQIKAVLLES 480 VGFHGLI

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MLPRLNGAVW MGDREDRDSA SWNRTTAATT NNSNCGVVES KDELGSLSTF KSMLDVDDWY  60
LPNNSIQSHS DVRDIAFSPS FADPESLLLN PVDSSSSCSP SSSVFNNLDP NQVHYYLPQN  120
STLSSLLNVV PNNPLEHGFD LGCDIGFLDT QASSGSSLMN RGGGVLTGFS GLSSNNQMNA  180
QDLCSNLQFS TTRLPQLLEN SSNFSGFRGF EDTSANALFP NRPKLLRPLD SVPDVGAPPT  240
LFQKRVQKNL ADNGGNLDDF TENTKMDDGA KNGGNSSNAN STVTGGGDHK GKKKGLPAKN  300
LMAERRRRKK LNDRLYMLRS VVPKISKMDR ASILGDAIEY LKELLQKINN LHNELESIPP  360
GSSLTPTGST FHPLTPTPAT LPSRIKEELC PSSLPSPNGQ PARVEVRLRE GRAVNIHMFC  420
GRRPGLLLST MRTLDSLGLD IQQAVISCFN GFAMDVFRAE QCKEGQDVHP DQIKAVLLES  480
VGFHGLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	310	KKKGLPAKNLMAERRRRKK
2	304	311	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-127	bHLH family protein