PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g366330.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 481aa MW: 52683.6 Da PI: 6.1484

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g366330.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.5	3.7e-16	312	358	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq Pd.00g366330.m01 312 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 358 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MNRCVPDFEM EDDYSIPTSS APNRLRKSSL PDDEIMELLW QNGQVVMQSQ NQRPSPNNKK 60 SSQAPSKYDA VLPEDRDIPR PQPHPTHQNH QLFMHEDEMA SWLQYPLVDD PFCADLLYPD 120 SSTAAAAAEL RPNPISAPPI HPPRRTELQN FLHFSRTNNN KDRVSEAAPS SSKSVVREST 180 TVVDSCDTPL VGHSSRALDS GLDGGGGVTA GAATSFVTVA TANAATSFPG KEVMTCEMSL 240 TSSPGGSSAS ASASAEPISS QKPRADEDRK RKGRDAEDDG EFQSEDVEFE SANGKKKSRG 300 STSTKRSRAA EVHNLSERRR RDRINEKMKA LQELIPRCNK SDKASMLDEA IEYLKSLQLQ 360 VQMMSMGCGM VPMMFPAGSS IPTAAAHLGP RFPVPPFHMQ PIPANDPARV QATNQSDQML 420 NVLAAQNPNQ SRVPNFADPY QQFFNPQQMQ LPLQQNQAMA QPSSKPSSSK GPETQENHQS 480 G

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MNRCVPDFEM EDDYSIPTSS APNRLRKSSL PDDEIMELLW QNGQVVMQSQ NQRPSPNNKK  60
SSQAPSKYDA VLPEDRDIPR PQPHPTHQNH QLFMHEDEMA SWLQYPLVDD PFCADLLYPD  120
SSTAAAAAEL RPNPISAPPI HPPRRTELQN FLHFSRTNNN KDRVSEAAPS SSKSVVREST  180
TVVDSCDTPL VGHSSRALDS GLDGGGGVTA GAATSFVTVA TANAATSFPG KEVMTCEMSL  240
TSSPGGSSAS ASASAEPISS QKPRADEDRK RKGRDAEDDG EFQSEDVEFE SANGKKKSRG  300
STSTKRSRAA EVHNLSERRR RDRINEKMKA LQELIPRCNK SDKASMLDEA IEYLKSLQLQ  360
VQMMSMGCGM VPMMFPAGSS IPTAAAHLGP RFPVPPFHMQ PIPANDPARV QATNQSDQML  420
NVLAAQNPNQ SRVPNFADPY QQFFNPQQMQ LPLQQNQAMA QPSSKPSSSK GPETQENHQS  480
G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	269	297	RKRKGRDAEDDGEFQSEDVEFESANGKKK
2	317	322	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	2e-62	bHLH family protein