PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g364380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 255aa    MW: 29559.4 Da    PI: 5.8885
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g364380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR182.38.5e-2680170190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY +Y+++ GF+vr++++++s++n+ ++ ++fvCs+eg+r+++    +++   + ++tr gC a+l+v +++ +kw+vtk+++eHnH+l+
  Pd.00g364380.m01  80 DFYIAYGRHSGFTVRIHHNRRSRMNNMVIGQDFVCSREGFRDKKYVCrEDRVLPPPPVTREGCAAMLRVALRDGEKWVVTKFVKEHNHTLM 170
                       6*****************************************998772333344899*******************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MESKANNISF NSDESETCLE FESCDEHLLI DDDELPKDID LCSLEVDKII QQPNASLPLM  60
GNAVEPYIGM GFKSRDDARD FYIAYGRHSG FTVRIHHNRR SRMNNMVIGQ DFVCSREGFR  120
DKKYVCREDR VLPPPPVTRE GCAAMLRVAL RDGEKWVVTK FVKEHNHTLM APSKVPWRGF  180
GKNLISEDEK DQKIRDLTIE LSNERQRCKR RCAAYQEQIS TLLKDIQEHS DHLSTRVQDI  240
VRNIRELENE QCVDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205210RQRCKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-41FAR1 family protein