PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g359980.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 382aa MW: 43002.8 Da PI: 4.9924 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.2 | 5.2e-07 | 196 | 225 | 2 | 31 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 2 rrahnerErrRRdriNsafeeLrellPkas 31 ++h + E RR+++N ++ Lr+l+P+++ Pd.00g359980.m01 196 ETNHYATEMHRRAQLNGKYKALRDLVPNPT 225 689*************************84 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
MYEDTVGCNF DPNSMPESAE TVLNVNPLPS PPQVLMPSPS ETHKNNNFAV AKNLRLSIEE 60 ISYPRQQDHH AAVEIELQNE VGFNPYSTNT DQNNNSSHLL SFEQQTNWDT AGGVDAPPRT 120 VSSVFYDPLL HLNLPPQPPL HRELYQSLFS SGGDEREGIG GVVYSDGINN GRQFENGVLE 180 FSREMGSIGR GRDVKETNHY ATEMHRRAQL NGKYKALRDL VPNPTKELLW IVEELKIWLV 240 EKKRCGRERH QTEQDGGAGD GESCKPLGDP QDQSYNNGSL RSSWLQRKYK DTEVDIRIID 300 DEVSIKLVQT KKINSLLYVS KLLDELQLDL HHAEGGHIGN SYSFLFNTKM HEESFLYAKA 360 IGDKLIEVLD GQYAAVPSTS SY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 6e-61 | bHLH family protein |