PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g359950.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 678aa MW: 75724.5 Da PI: 7.5428

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g359950.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.7e-12	477	523	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E+ RR ++N ++ Lr llP++ +K + a+i+ +A++YIk+L Pd.00g359950.m01 477 TKHFATEKHRRVQLNGKYTALRNLLPHP-----TKSDRASIVGEAIDYIKEL 523 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MLVNGLLPDN YTVPSILKAC AQSRALREGQ QMHTYAIKTG LVLSNVYVKN TLMRLYAVCG 60 VINCVRNLFD EGPQRDLVSW TTLIQGYVKM GLPREGVEAF FDMCDAKMMA DEMTLVIVLS 120 ACSKLGDLNL GRKINEYIYD NGVYRDVFIG NALVDMYLKC GDADFAYKVF NEMPVRNVVS 180 WNSMISGLAH QGKFKEALDV FREMQRIGLE PDDVTLVGVL NSCANLGVLE LGEWVHAYVD 240 RNRIEADGFI GNALVDMYAK CGSIDQAFRV FQGMKLLDFV ETKLFRYKRE TKHTHKRQKA 300 PEDKLKTGPK MYEDTMQQQL QDGANGAYPP TPDLLNLFSL PRCSPSSVLQ NSSITFTNPN 360 PKNSNFPNSL GFLGDVHGGI DTPPGTASSV LYDPLFHLNL PPQPPLFREL LQSLPHGYSL 420 PGSRNGSLFT SGGDEGEGIG GGVYSDGINN GRQFENGVLE FSREMGSIGR GRDVKGTKHF 480 ATEKHRRVQL NGKYTALRNL LPHPTKSDRA SIVGEAIDYI KELLRTVEEL KLLVEKKRCG 540 RERSKRRRTE QDGGAGDDES CNMKPLGDPH DQYGSLRSSW LQRKSKDTEV DIRIIDDEVT 600 IKLVQRKKIN LLLYVSKLLD ELQLDLHHVA GGHIGNSYSF LFNTKMYEGS SLYASAIAQK 660 LIEVLDKQYA AVPPTNSF

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MLVNGLLPDN YTVPSILKAC AQSRALREGQ QMHTYAIKTG LVLSNVYVKN TLMRLYAVCG  60
VINCVRNLFD EGPQRDLVSW TTLIQGYVKM GLPREGVEAF FDMCDAKMMA DEMTLVIVLS  120
ACSKLGDLNL GRKINEYIYD NGVYRDVFIG NALVDMYLKC GDADFAYKVF NEMPVRNVVS  180
WNSMISGLAH QGKFKEALDV FREMQRIGLE PDDVTLVGVL NSCANLGVLE LGEWVHAYVD  240
RNRIEADGFI GNALVDMYAK CGSIDQAFRV FQGMKLLDFV ETKLFRYKRE TKHTHKRQKA  300
PEDKLKTGPK MYEDTMQQQL QDGANGAYPP TPDLLNLFSL PRCSPSSVLQ NSSITFTNPN  360
PKNSNFPNSL GFLGDVHGGI DTPPGTASSV LYDPLFHLNL PPQPPLFREL LQSLPHGYSL  420
PGSRNGSLFT SGGDEGEGIG GGVYSDGINN GRQFENGVLE FSREMGSIGR GRDVKGTKHF  480
ATEKHRRVQL NGKYTALRNL LPHPTKSDRA SIVGEAIDYI KELLRTVEEL KLLVEKKRCG  540
RERSKRRRTE QDGGAGDDES CNMKPLGDPH DQYGSLRSSW LQRKSKDTEV DIRIIDDEVT  600
IKLVQRKKIN LLLYVSKLLD ELQLDLHHVA GGHIGNSYSF LFNTKMYEGS SLYASAIAQK  660
LIEVLDKQYA AVPPTNSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	1e-80	bHLH family protein