PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g358290.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 362aa    MW: 39779.2 Da    PI: 4.5435
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g358290.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.62.2e-15196232135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++Cg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  Pd.00g358290.m02 196 CQHCGISEksTPAMRRGPAGPRSLCNACGLMWANKGT 232
                       *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MEMVNAQLLQ ARAYEGEDQL VHIPAELEGD YDEGGGAKAA MNGGDQARRS SGVTMSRCNS  60
ALPSRTSELT IAFEGEVHVF PAVTPDKVQA VLLLLGGRDI SSSFPSSESL LESNSGGIGD  120
ISRNSKLSRR TASLVRFREK RKERCFENKI RYTCRKEVAQ RMYRKNGQFA SLKDDSKIAS  180
GNCDSSDGTS CPESVCQHCG ISEKSTPAMR RGPAGPRSLC NACGLMWANK GTLRDLTKAG  240
RPIHFDQNEL ETAADFKPLM LKPENAHLDL DEEGSPEESK PIALDTENPP LRLVDEDMLE  300
TAEAAANHIS IQMENSTVNF DEQENLDEFC NASGTEFEIP ANFDEQVVDF YDCNIETHWP  360
GT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-50GATA family protein