PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g358280.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GATA | ||||||||
Protein Properties | Length: 285aa MW: 30315.9 Da PI: 5.019 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49 | 8.6e-16 | 193 | 229 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg ++ Tp++Rrgp g++tLCnaCGl+++ kg+ Pd.00g358280.m01 193 CMHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGV 229 99***99889************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MYGSGGAPQS NQVEEQEDDV EESIDNPHIR FEDSNAIPPN PLYLTSSEYP PAAVTNGGSD 60 QLTLSFQGEV YVFDEVSPDK VQAVLLLLGG YEIPSGIPSM GPVPLNQQGM NDLPVKPIQP 120 QRAASLSRFR EKRKERCFDK KIRYTVRKEV ALRMQRKKGQ FTSSKASSDD GAPASSGATQ 180 GSGQDESMQE TSCMHCGISS KSTPMMRRGP AGPRTLCNAC GLKWANKGVL TGGPKVSNIG 240 MQDPSAKGIE QGDGEAKDSV AITMGANIAP SSNGDNSAMT VDGNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 1e-68 | GATA family protein |