PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g356810.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 424aa MW: 46422.2 Da PI: 8.0336 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.2 | 1.7e-17 | 55 | 104 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g Pd.00g356810.m01 55 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 104 59*******.**********93....35999**********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MEEAFRRLNG FTRSTEPDPI SDPPRKSTTA TPTNKRMLRD TTTAAGTGTG AGAMRYRGVR 60 RRPWGRYAAE IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGLKARTN FVYPPSPPHA 120 AVNDHLLPPF SFHKQSQPSV KSRNGYGAGH SSSWPSVTPF TQYPTTNNND AAASPLNMLF 180 FRNFINSSPN PSPVYNQFPY NISGSSSSSS SAALVNTASC GQPHETNMSA STNFSSTGTG 240 SSSSMTVPTS VPLMDITTSS TKPTTHDDHS DFFAVEPSDS GLLEEVIHRF FPKPTSKKPM 300 DPPKSADYVR HNMNNIPSSS SQASFVSANQ APPFDGPTKN HPHQHGGVCY NFEELLPQPQ 360 QLGNSFSVGM DYQPQVSQTT QTVPFYNDHV PINVQLSGQD YSMVDNNMFQ YPEFMGGFAG 420 RVQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 6e-14 | ERF family protein |