PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g356810.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 424aa    MW: 46422.2 Da    PI: 8.0336
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g356810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.7e-1755104255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  Pd.00g356810.m01  55 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 104
                       59*******.**********93....35999**********************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MEEAFRRLNG FTRSTEPDPI SDPPRKSTTA TPTNKRMLRD TTTAAGTGTG AGAMRYRGVR  60
RRPWGRYAAE IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGLKARTN FVYPPSPPHA  120
AVNDHLLPPF SFHKQSQPSV KSRNGYGAGH SSSWPSVTPF TQYPTTNNND AAASPLNMLF  180
FRNFINSSPN PSPVYNQFPY NISGSSSSSS SAALVNTASC GQPHETNMSA STNFSSTGTG  240
SSSSMTVPTS VPLMDITTSS TKPTTHDDHS DFFAVEPSDS GLLEEVIHRF FPKPTSKKPM  300
DPPKSADYVR HNMNNIPSSS SQASFVSANQ APPFDGPTKN HPHQHGGVCY NFEELLPQPQ  360
QLGNSFSVGM DYQPQVSQTT QTVPFYNDHV PINVQLSGQD YSMVDNNMFQ YPEFMGGFAG  420
RVQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.16e-14ERF family protein