PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g356420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TALE | ||||||||
Protein Properties | Length: 197aa MW: 22776.5 Da PI: 5.1689 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.4 | 6.9e-10 | 140 | 174 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+++gL++rq+ +WF N+R ++ Pd.00g356420.m01 140 KWPYPTEADKIALAESTGLDQRQINNWFINQRKRH 174 569*****************************885 PP | |||||||
2 | ELK | 28 | 5.1e-10 | 94 | 115 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++L+r +++++g+Lk EFs Pd.00g356420.m01 94 DLKDRLMRRFGSHIGTLKLEFS 115 69*******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MSSTYLGADP ELDEFMETYC EMLVKYKSDL SRPFDEATTF LNKIELQLSN LCTSSAHASS 60 IRTLSDEGGA SSDEDFSGGE IEVQEAQQRG EDRDLKDRLM RRFGSHIGTL KLEFSKKKKK 120 GKLPKEARQT LFDWWSVHYK WPYPTEADKI ALAESTGLDQ RQINNWFINQ RKRHWRPSEN 180 MQFAVMDNIA GPFFTDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23380.1 | 4e-92 | TALE family protein |