PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g356150.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 438aa MW: 48444 Da PI: 6.6429 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25 | 3.5e-08 | 300 | 341 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+ri+++ + Lr l+Pk + K++ +i AveYI +L Pd.00g356150.m01 300 AERNRRSRIKDGHFALRALVPKiS------KMDIPAIIGDAVEYIEEL 341 7*********************66......***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 438 aa Download sequence |
MRNLEGVAES LRPLVESKQW DYCVVWKLGD DPSRFIEMMG CCCGGGYEYD CVNVKEEEGE 60 PHSAKLCRDG FLKHPIRTKG CEALAQLPSS MPLYSGIHTE VIISAQPRWL SGHVNASGSN 120 PSQSHDFVGT RVLIPVLSDL IELFSTKNIP ENQKMLELFM APFNNSLKQE PMATHDNGNV 180 NLNASASLNE FHVDPLPEEC PEKLLPSLNL ANFIPGPQVF PSSVSQTTSC PILEGSSSGS 240 NPSSEHPLLS SHSRKSRRGD NLLQQQAGLA SGSGTVVEKH KAKVTRKTGS GQYQSKNLFA 300 ERNRRSRIKD GHFALRALVP KISKMDIPAI IGDAVEYIEE LKKKVKELED ELREIEEEED 360 LTKNKADVKI LASDMRKEGS ICLISTEHKQ GSSSFVQKSP TAVQVEVNQI GKRDCLIKLF 420 YEQSRGGFAS LMENMGFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10610.1 | 2e-36 | bHLH family protein |