PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g356150.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 438aa    MW: 48444 Da    PI: 6.6429
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g356150.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.5e-08300341854
                       HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       +Er+RR+ri+++ + Lr l+Pk +      K++  +i   AveYI +L
  Pd.00g356150.m01 300 AERNRRSRIKDGHFALRALVPKiS------KMDIPAIIGDAVEYIEEL 341
                       7*********************66......***************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    
MRNLEGVAES LRPLVESKQW DYCVVWKLGD DPSRFIEMMG CCCGGGYEYD CVNVKEEEGE  60
PHSAKLCRDG FLKHPIRTKG CEALAQLPSS MPLYSGIHTE VIISAQPRWL SGHVNASGSN  120
PSQSHDFVGT RVLIPVLSDL IELFSTKNIP ENQKMLELFM APFNNSLKQE PMATHDNGNV  180
NLNASASLNE FHVDPLPEEC PEKLLPSLNL ANFIPGPQVF PSSVSQTTSC PILEGSSSGS  240
NPSSEHPLLS SHSRKSRRGD NLLQQQAGLA SGSGTVVEKH KAKVTRKTGS GQYQSKNLFA  300
ERNRRSRIKD GHFALRALVP KISKMDIPAI IGDAVEYIEE LKKKVKELED ELREIEEEED  360
LTKNKADVKI LASDMRKEGS ICLISTEHKQ GSSSFVQKSP TAVQVEVNQI GKRDCLIKLF  420
YEQSRGGFAS LMENMGFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.12e-36bHLH family protein