PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g354840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 991aa    MW: 113253 Da    PI: 8.9644
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g354840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.8e-10376420246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ Ed+ l+++v++ G ++W  Ia  +g++Rt+ qc  r+q 
  Pd.00g354840.m01 376 KSWTAKEDKNLLHLVQEKGIDNWFNIAVLLGTNRTPFQCLARYQR 420
                       58*****************************************96 PP
2Myb_DNA-binding43.95.4e-14429472246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                         WT++Ed +l  av+ lG g+W ++a+ +  gRt+ qc +rw k
  Pd.00g354840.m01 429 REWTKDEDARLRSAVEALGEGDWQSVASALE-GRTGSQCSNRWKK 472
                       68*****************************.***********98 PP
3Myb_DNA-binding44.82.9e-14482525246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       grWT+eEd++l+ a  ++G+++W++ a+ ++ gRt  qc++r+ +
  Pd.00g354840.m01 482 GRWTPEEDKRLKVAQMLFGPKNWNKTAQFVP-GRTQAQCRDRYVN 525
                       8******************************.***********77 PP
4Myb_DNA-binding43.19.7e-14534577247
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       g WT+eEd +l +a++ +G   W+++a++++ +Rt+++c  rw  +
  Pd.00g354840.m01 534 GEWTEEEDSRLREAIADYGYC-WSKVAACVP-RRTDNMCWRRWKVL 577
                       68*****************99.*********.***********865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 991 aa     Download sequence    
MYPLTETQEN QFSGSDRERE EEDFDEDMEA IRRAFDDDIE LLRKIRSRFS NVSDFCQPLS  60
LKPLSSLPPA VSDDEEDDYQ TLLSVQKRFA AYQNDTCKPV KETCNKIAHE SSQGTEDACM  120
AIHPLSDNAE GQPSASIELQ QSDSCRPSTL PAKYSTFPKS AQVFMDAIKK NRSSQKFLRS  180
KLVQIEAKIE ENRKLKERVK ILKDFQVSCK KRTGEALSQK KDPRVQLILV NRPRNFRDLK  240
AHDKKISAMF YGPEENSHVA NYRMTLTKFL HSLDRKKWSK AEKKALEKGI RQQFQEMVLQ  300
FSVHESSCSE RPYGDSNHID DILASIKDLE ITPEKIREFL PKVNWEQLAS MYIVGRSGGE  360
CEARWLNWED PLINHKSWTA KEDKNLLHLV QEKGIDNWFN IAVLLGTNRT PFQCLARYQR  420
SLNASILKRE WTKDEDARLR SAVEALGEGD WQSVASALEG RTGSQCSNRW KKSLHPTRKR  480
EGRWTPEEDK RLKVAQMLFG PKNWNKTAQF VPGRTQAQCR DRYVNSLEPS LKWGEWTEEE  540
DSRLREAIAD YGYCWSKVAA CVPRRTDNMC WRRWKVLFPD EVSLLKEEKR IRKAALMCNF  600
VDRETERPAL GPNDFRPPIV TSTKTLTYSR KQKGKLSKIS KKIRSRRQRN NSQSCSKVSE  660
IDNFDKVETY DGHDASNRKN KVRKQRRIRH KGTEPTGECQ VVVTLPCEQD THKEPREMSC  720
SDQIVGTSDG DDTTLACFLR NKSKKRKLGP VPSINGKKKR MLVASDSAVQ ECPANSIQKG  780
SEVHPEMDEV CDGNQIVSFW KDDEFTVHCD DRISERMPPC SVQSSHLNGN IMASDNEPDG  840
LKLVSGWKAG LQEPVRKVVG IDPESDGDTD DFVLASLRKK KLKKRHPQTA KSGPHACPPS  900
GVTTRSEPLP KRVEQSNNRS QVPFVAVGNE PGAVDIGKQH GVDHRETVKE IVNIGAEGDH  960
EAGDTTLACF LRNKSNNRQR QSRRCDNQKP R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1677684NRKNKVRK
2739747LRNKSKKRK
3744760KKRKLGPVPSINGKKKR
4745761KKRKLGPVPSINGKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.10.0MYB family protein