PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g352470.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 355aa    MW: 39960.7 Da    PI: 8.1714
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g352470.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.53.4e-131157155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      s y+GV++++++gr++A+++d        +++lg ++ +e Aa+a++ a++k++g
  Pd.00g352470.m01 11 SIYRGVTRHRWTGRYEAHLWD--------KIYLGAYDDEEAAARAYDLAALKYWG 57
                      57****************999........79**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MPPCAAGKRS SIYRGVTRHR WTGRYEAHLW DKIYLGAYDD EEAAARAYDL AALKYWGPGT  60
LINFPVTDYT RDLEEMQNMS REEYLASLRR KSSGFSRGIS KYRGLSSRWE PSLGRMGGSE  120
YFNSIHYGTG DDPATESEFL GAFCIERKFD LTSYIKWWGT NKSRQADTST KSSEETKHGF  180
VGDIGVELKT LEWEIQPTEP YQIPRLGISR VSKKHKGARV SAMSILSRSA AYKNLQENAS  240
KKQENNADND ENENKNTIHK MDYGKAVEKS TSHDERLSAA LGMSSGLSLQ VQRNAFPLTP  300
FLSAPLMTNY NTIDPLVDPI LWTSLAPVLP SGISRTAEIT KTETSSTFTL FRPEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-125AP2 family protein