PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g351580.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 376aa MW: 41491.8 Da PI: 7.3979

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g351580.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	97.9	1.9e-30	55	195	2	132
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.... 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLq++LG+ ++sk ++WLl +ak++i+ l+ ++ +++ ++ ++ s + ++s+ ++ Pd.00g351580.m01 55 FGGKDRHSKVCTVKGLRDRRVRLSVPTAIQLYDLQERLGLNQPSKVVDWLLDAAKHEIDVLPPLPLPPSGNFglNHPSLVLTSSHGVQThaha 147 689*************************************************************77777333332222222222111111112 PP TCP 89 ..............................kaaksaakskksqksaasalnlakesrakarararertrekmri 132 + k+++ ar+ t+e+ Pd.00g351580.m01 148 qlshdngegpsggiaparshfwstnsdaiwR--------------------------GKSKEIARDTTNEEEEE 195 2222222223444434333333333333331..........................33333333333332222 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MIKSPNEADL QEAAGNSSRD DQANKFSTKA NDLSRPSTPW LRLKDPRIVR VSRAFGGKDR 60 HSKVCTVKGL RDRRVRLSVP TAIQLYDLQE RLGLNQPSKV VDWLLDAAKH EIDVLPPLPL 120 PPSGNFGLNH PSLVLTSSHG VQTHAHAQLS HDNGEGPSGG IAPARSHFWS TNSDAIWRGK 180 SKEIARDTTN EEEEENQKDI STGSDQKEER TVDGNSSSNN FLTRISTNHP FFPGLVNNAM 240 PYAYHNWDHN QPSNFPLSQL GSHGFPSQTA DLHNFINVVS LPSTLSLSTT QSYFPSHNAA 300 AAAEIDPRQF NHMHMLSSSS TSQNLLPNSL SPTLYPNTQT LRAPHLSMMT KLVRSSNNTT 360 GSDHHQPNTD QESPSR

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MIKSPNEADL QEAAGNSSRD DQANKFSTKA NDLSRPSTPW LRLKDPRIVR VSRAFGGKDR  60
HSKVCTVKGL RDRRVRLSVP TAIQLYDLQE RLGLNQPSKV VDWLLDAAKH EIDVLPPLPL  120
PPSGNFGLNH PSLVLTSSHG VQTHAHAQLS HDNGEGPSGG IAPARSHFWS TNSDAIWRGK  180
SKEIARDTTN EEEEENQKDI STGSDQKEER TVDGNSSSNN FLTRISTNHP FFPGLVNNAM  240
PYAYHNWDHN QPSNFPLSQL GSHGFPSQTA DLHNFINVVS LPSTLSLSTT QSYFPSHNAA  300
AAAEIDPRQF NHMHMLSSSS TSQNLLPNSL SPTLYPNTQT LRAPHLSMMT KLVRSSNNTT  360
GSDHHQPNTD QESPSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	6e-48	TCP family protein