PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g350920.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 1721aa MW: 187451 Da PI: 6.4539

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g350920.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.3	2.3e-10	805	848	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE el+++ + G++ +++Ia+ + ++t +c+++++k+ Pd.00g350920.m01 805 NPWTPEEKELFIEKLTTCGKD-FRKIASFLD-HKTTADCVEFYYKH 848 69***************99.*****.**********97 PP
2	Myb_DNA-binding	26	2.2e-08	1024	1064	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+r++ +R+ qck ++ Pd.00g350920.m01 1024 DWTDAEKSSFIQAVSSYGKD-FAMISRCVR-TRSQHQCKVFFS 1064 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1721 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG 60 GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW 120 ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG 180 AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA 240 TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS 300 VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR 360 NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK 420 LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPCP ATSSSLPVED NDKSFKEQVT 480 VTNLITRPAP LQIHSSGDTD AEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV 540 KVVSSSDVMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSACGNSSM LLGSEIVAPV 600 PGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGIS ISSSGKNDSL 660 IKEKFAMRKR RLRFMERVLT LKYRAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG 720 YQKHRSSIRS RFSTPAGNLS LVPTTEIINF TNKLLSDSQV KCYRNSLKMP ALILDKKEKM 780 VTRFISSNGL VEDPCVVEKE RALMNPWTPE EKELFIEKLT TCGKDFRKIA SFLDHKTTAD 840 CVEFYYKHHK SVCFEKTKKK ADMTKQGKSS AKTYLISNGK KWNREMNAAS LDILGAASAI 900 AAHADGSTRS RQAYSGRLFL GGYRNTNPSR GDDTTVERSC SFDAIGNERE TVAADVLAGI 960 CGSLSSEAVS SCITSSIDPG EGYREWKCQK VDSLARRPLT PDVMQNVDDE TCSEESCGEM 1020 DPSDWTDAEK SSFIQAVSSY GKDFAMISRC VRTRSQHQCK VFFSKARKCL GLDLVHPVAG 1080 NGTSVGDDVN GGGSDTEDAC VLETGSGISS DKSGCRMNED MPLSVINMDD ESDPAETMNL 1140 QTGPLRSEEN NVMGQLDHEG VQTLKSLASD ALEAEDRPNL VLDDAQKSRV LSADALKDDV 1200 AEEGILIAES EPVGGGINFD PTNPGMDGEK LMGELSSDGN TDTSRCSLPG SVHDSNSSGN 1260 ASALAGGGSC SGFSLNPECL HQVSVGLNSM QKPSVISMPH ENRHAPADSV SQDSAKIECE 1320 KAFNQDRLSS TLDLQEGRDP KSVGIDECHQ HLPGLPIYTN VESSQVLKGY PLQMATKKDT 1380 NGDVMSGNLS EVQNFSKPDR KINGHYMTKD GFLQFGNCKP QWSEVDFPLA PQKVEQPVGP 1440 PKAHSWSSSD SDKPSRNGDV KLFGKILSNP SSLSKSSSNI HENEEKGAHN HKLSNTSSNL 1500 KFTGHHNADG NSSLLKFDCS SYLGIEKVPR RSYGLWEGNK VHSGYPSFSD SAILLAKYPA 1560 AFGNFPTTSS KMEQQPLQAV VKNNDRNING VSVFPSREIS GSNGVVDYPV FSRSRDGAKV 1620 PPFTVDVKQQ QQRQDVFDMP RRNGFDTISS LQQQGRGIVG MNVVGRGGRG GILVGGPCTG 1680 VSDPVAAIRM HYAKTEQYGG QPGSMIREEE SWRGGKGDVG R

Sequence ? help Back to Top

Protein Sequence Length: 1721 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG  60
GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW  120
ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG  180
AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA  240
TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS  300
VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR  360
NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK  420
LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPCP ATSSSLPVED NDKSFKEQVT  480
VTNLITRPAP LQIHSSGDTD AEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV  540
KVVSSSDVMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSACGNSSM LLGSEIVAPV  600
PGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGIS ISSSGKNDSL  660
IKEKFAMRKR RLRFMERVLT LKYRAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG  720
YQKHRSSIRS RFSTPAGNLS LVPTTEIINF TNKLLSDSQV KCYRNSLKMP ALILDKKEKM  780
VTRFISSNGL VEDPCVVEKE RALMNPWTPE EKELFIEKLT TCGKDFRKIA SFLDHKTTAD  840
CVEFYYKHHK SVCFEKTKKK ADMTKQGKSS AKTYLISNGK KWNREMNAAS LDILGAASAI  900
AAHADGSTRS RQAYSGRLFL GGYRNTNPSR GDDTTVERSC SFDAIGNERE TVAADVLAGI  960
CGSLSSEAVS SCITSSIDPG EGYREWKCQK VDSLARRPLT PDVMQNVDDE TCSEESCGEM  1020
DPSDWTDAEK SSFIQAVSSY GKDFAMISRC VRTRSQHQCK VFFSKARKCL GLDLVHPVAG  1080
NGTSVGDDVN GGGSDTEDAC VLETGSGISS DKSGCRMNED MPLSVINMDD ESDPAETMNL  1140
QTGPLRSEEN NVMGQLDHEG VQTLKSLASD ALEAEDRPNL VLDDAQKSRV LSADALKDDV  1200
AEEGILIAES EPVGGGINFD PTNPGMDGEK LMGELSSDGN TDTSRCSLPG SVHDSNSSGN  1260
ASALAGGGSC SGFSLNPECL HQVSVGLNSM QKPSVISMPH ENRHAPADSV SQDSAKIECE  1320
KAFNQDRLSS TLDLQEGRDP KSVGIDECHQ HLPGLPIYTN VESSQVLKGY PLQMATKKDT  1380
NGDVMSGNLS EVQNFSKPDR KINGHYMTKD GFLQFGNCKP QWSEVDFPLA PQKVEQPVGP  1440
PKAHSWSSSD SDKPSRNGDV KLFGKILSNP SSLSKSSSNI HENEEKGAHN HKLSNTSSNL  1500
KFTGHHNADG NSSLLKFDCS SYLGIEKVPR RSYGLWEGNK VHSGYPSFSD SAILLAKYPA  1560
AFGNFPTTSS KMEQQPLQAV VKNNDRNING VSVFPSREIS GSNGVVDYPV FSRSRDGAKV  1620
PPFTVDVKQQ QQRQDVFDMP RRNGFDTISS LQQQGRGIVG MNVVGRGGRG GILVGGPCTG  1680
VSDPVAAIRM HYAKTEQYGG QPGSMIREEE SWRGGKGDVG R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein