PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g348620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 371aa    MW: 41486.4 Da    PI: 6.6535
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g348620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.71.2e-17160206148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g WT eEd +l+++vkq+G + W+ Ia+++  gR +kqc++rw+++l
  Pd.00g348620.m01 160 KGQWTDEEDRKLIRLVKQYGVRKWAQIAEKLV-GRAGKQCRERWHNHL 206
                       799*****************************.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MEGEGGGEEG GGGYGVYGLI NNTQPHHPHH HHQNMHRPGP PLTAIDRFLW GSQSNFSHQN  60
NASSKENVVS TNGLFGFSSF GGAIGHEASC WPSYGAGGQY PQEVSFLDGL LGDHGEALMM  120
SWSGQAEQNP NTGFIEEAKV SERRVGKRAR KGLTAAALIK GQWTDEEDRK LIRLVKQYGV  180
RKWAQIAEKL VGRAGKQCRE RWHNHLRPDI KKDSWTEEEE MILVEAHTEL SYDHQVLLDY  240
LISKDTGISC AEYLLRCLRK VCDSWSLFVE FLVGGQATNQ SFCKKRSVSL GGSSSWVEDS  300
LAPTKNHLTF LDDEPDEENE NGCKHTQNGG QYFKEAKECL LSLKISIEGL HQKNLFPYNP  360
NVLLNRYVSL K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.16e-38MYB family protein