PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g348490.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 302aa    MW: 34063.3 Da    PI: 9.8696
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g348490.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.32e-14131175347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT++E++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
  Pd.00g348490.m01 131 PWTEDEHKLFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 175
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEILSPSSYF SSSNWLLEES KSTQWTPAEN KMFENALAVH DKDTPDRWLK VAAMIPGKTA  60
MDVMKQYEEL EVDVGKIEAG LVPIPGYSAS PFTLEWVNRH GYDGFKQSYG LGGKRSSSAR  120
PADHERKKGV PWTEDEHKLF LLGLKKYGKG DWRNISRNFV VTRTPTQVAS HAQKYFIRQL  180
SGGKDKRRAS IHDITTVNLN EMRTPSPDNK RPLSPELSVP QQPNSAATAR TPFQWHHQQG  240
GGANMAFNQA HRNMFMSHPY GIGSYGLKMQ GQDLHKGAAN NSYYAPQNMV FQMQSAQHYP  300
YG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.13e-93MYB family protein