PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g347180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 762aa    MW: 85442.6 Da    PI: 5.3303
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g347180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.34.4e-1193877571373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL+ cA+avs++d + a++lL+++++++sp gd  qRla++f+++L+arla++++++y al++++ts    ++ l+a++++  ++P++k+
  Pd.00g347180.m01 387 LRTLLILCAQAVSADDRRTANELLKQIRQHSSPFGDGSQRLAHCFANGLEARLAGTGTQIYTALSSKRTS---AADMLKAYQTYIAACPFMKV 476
                       5789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       + + aN++I + +e++e++HiiDf+i +G+QWpaL++ L+ R++gpp+lRiTg++ p+sg   +e+++etg+rLak++e+ +vpfe+++ +ak
  Pd.00g347180.m01 477 AIIFANHMISKLAEKAETLHIIDFGILYGFQWPALIHCLSRRTGGPPKLRITGIELPQSGfrPEERVQETGHRLAKYCERYNVPFEYTA-IAK 568
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e++++eeL+vk++E+laVn+ ++ ++llde+v+++s+rd+vL+l+++++P+++v++  + ++ ++ F++rf eal ++salfd+++++lpr
  Pd.00g347180.m01 569 KWETIQIEELKVKRNEVLAVNCLFRFKNLLDETVAVNSPRDAVLNLIRRMNPDIFVHAIINGSYHAPFFVTRFREALFHFSALFDMFDTNLPR 661
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       e+  r++ E+e+lgre+vn +aceg+er+ r et+++W+ r ++aGFk++pl+ + +++ ++ ++  + + + v+e+ +++++gWk+r ++  
  Pd.00g347180.m01 662 EDPMRSMFEEEFLGREVVNTIACEGSERVVRPETYKQWQVRNMRAGFKQLPLDRELMNKLRMKVKLGYHRDFVVDEDGNWMLQGWKGRIIYCS 754
                       ********************************************************************999********************** PP

              GRAS 371 SaW 373
                       S+W
  Pd.00g347180.m01 755 SCW 757
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 762 aa     Download sequence    
MLCLLWSSSL SPNPCLLPMT STKEWNRVSL FFPSSSLSSG DQTLSPNFNE YPSSDPFVDL  60
SFLDQNPGNS ALSPSLSPEG DDSDYSDSVL KYINQVLMEE DMVTKPCMFH DPLAVQAAEK  120
SLYEVLGEKY PPSPDQHPLN IESPDCPFSV TFSDFSAINS SSSSTSQSVD SRWSNADVIE  180
NKPSILETPI PDNFVFQSTS KPRSQLSSNG NESGNGLVGS YMSELMVSNL FSESELVLQF  240
NRGVEEASKF LPRGQLIVDV ENNKPYTVAS GKAEDVVVKT EKDDIELLAT SSRGKKSHER  300
EDTDLEDGRS NKQSAVYLED TEAELSEIFD KVLLCGGGKA EPFVCGGEEV CQDEANKALQ  360
QNGQSVGTGN GKTRAKKKGD KKEVVDLRTL LILCAQAVSA DDRRTANELL KQIRQHSSPF  420
GDGSQRLAHC FANGLEARLA GTGTQIYTAL SSKRTSAADM LKAYQTYIAA CPFMKVAIIF  480
ANHMISKLAE KAETLHIIDF GILYGFQWPA LIHCLSRRTG GPPKLRITGI ELPQSGFRPE  540
ERVQETGHRL AKYCERYNVP FEYTAIAKKW ETIQIEELKV KRNEVLAVNC LFRFKNLLDE  600
TVAVNSPRDA VLNLIRRMNP DIFVHAIING SYHAPFFVTR FREALFHFSA LFDMFDTNLP  660
REDPMRSMFE EEFLGREVVN TIACEGSERV VRPETYKQWQ VRNMRAGFKQ LPLDRELMNK  720
LRMKVKLGYH RDFVVDEDGN WMLQGWKGRI IYCSSCWVPS RT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein