PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g345760.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 437aa    MW: 47659.6 Da    PI: 6.3221
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g345760.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.3e-17127176155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Pd.00g345760.m02 127 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 176
                       78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MLDLNLNVVG SGPNDVESCG TQMNESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN  60
FDILKVRGGE DEEDDVVVTK ELFPVTGALS KWPGQGQSSA SSSLVRKNLM ELGFDHGGSG  120
EVRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGVDAD  180
INYNLSDYEE DLKQMKNLTK EEFVHILRRQ STGFSRGSSR YRGVTLHKCG RWEARMGQFL  240
GKKAYDKAAI KCNGREAVTN FEPSTYEGEM ISEAGNEDGD HNLDLNLGIS PPSFGNCQKE  300
VEGHLQFHSG PYDGHNGNRM EHNVNATMSD PPFKGLVMTS QHPPLWNGVY PSYFSNQERA  360
TEKRIALGSQ GPPNWAWQMH GQVSATPMPL FSTAASSGFS FSATAPSAAV HPLQPSTPTA  420
LNLCFTSPAT AAANTSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.11e-107AP2 family protein