PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g344250.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1577aa MW: 176767 Da PI: 9.3587

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g344250.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.9	4.9e-08	1410	1458	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v q G g+W++ r + +Rt+ ++k++w+++l Pd.00g344250.m02 1410 SWTSSEVMKLIEGVSQCGVGRWSAMKRLLFsscSHRTAVDIKDKWRNLL 1458 6*********************888887***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1577 aa Download sequence
MISKDREQLK DLSVRVFSVL LFFSFFSLPL PRIAGQDTAS YDLATELVLS RYSNLTPVFK 60 DELQSKFSFC IVDIDEDWDG AFNFSKDSRF ISNCAKKMAG GSIGEVLGRL CTAAEIKLYS 120 EGLLHSGKTS YLKPNKNCNL SSWVSGCEPG WACGSSEKVD PKNRTYVPVR SNDCAPCCEG 180 FFCPHGLTCM LPCPKGAYCP FAKLNNETGT CEPYSYQLPP GKQNHTCGGA DKWADFSSSK 240 EAGLIFILLI IYNCSDQVLA TREKRQAKSR EKAVQSVRET AQAREKWKSA KDIAKKHAVG 300 LSSQFSRTFS RRKSTRHSDQ LKGLGQAKPG TDAALPPMPP NEQSAGTSKG KNKDKGSLTQ 360 MIHAIEEDPN SHEGFNLEIG DKNIKKQTAK APKGKQLHTQ SQIFKYAYGQ IEKEKALQEQ 420 NANLTFSGVI EMAGDTEISK RPPIEVAFKD LTLTLKGKNK HLMRCVTGKI SPGRVSAVMG 480 PSGAGKTTFL SALAGKIRGC TMSGMILVNG KMESIHSYKK IIGFVPQDDI VHGNLTVEEN 540 LWFSARCRLS ADLPKPEKVL VVERVIESLG LQAVRDSLVG TVERRGISGG QRKRVNVGLE 600 MVMEPSLLIL DEPTSGLDSS SSNLLLRALR REALEGVNIC MVVHQPSYTL FKMFDDLILL 660 AKGGLTVYHG SVKKVEEYFA TLGITVPERV NPPDYFIDIL EGIVKPSTSS GVTYKQLPVR 720 WMLHNGYPVP MDMLQSSDGM AASAGENSAH GGSTPNAGSD GQSFAGDFWQ DVKCHVEVNK 780 DTLQHNFLKS SDLSERITPG VFQQYRYFLG RGGKQRLREA RTQAVDFLIL LIAGVCLGTL 840 AKVSDETFGA IGYTYTVIAV SLLCKIAALR TFGLDKLHYW RESSSGMSSL AYFLSRDTID 900 HFNTIIKPLV YLSMFYFFNN PRSSVIDNFI VLLCLVYCVT GIAYALAIYL APGPAQLWSV 960 LLPVVLTLIA NYNENKFVSR IADLCYTKWA LEAFVIANAK RRWSWLKRNC TGVLFMASPS 1020 DLSVRTPSEI RKKKLSRQRK REELERELLD IMFQGMDNAV CHGRISLPTC QEYLWEAKHS 1080 DKVFKLEGGP DSCLQNAGLE SHSPGVYKEY CGAEMADLSC ESTPRLGYKD NRSSLLLDHM 1140 SVQKRQLVFR NMFRYETPII DKQWPKYSIS PGLQNCFELE SGSNLAECGL MTKKNEGKTV 1200 LSSSIEFFGK DTGTIEGSLS DEGMSRDLQV KWKKLADLES LKTSNSRVSE IELCSSDERD 1260 KAGAFAMQKR SRRPPRRYIE ELAQSKSKFY SRKCGVACKR SKNSFLHVRS DKNNRQKETQ 1320 EETLLCQDKS YEVGCIQVPF GLPVEAGQLE EHNSSLNSED CKEDHKLLRS SEKLEIEYSP 1380 AKSREEISDD ECVLRRSTQK GSKQIKHYTS WTSSEVMKLI EGVSQCGVGR WSAMKRLLFS 1440 SCSHRTAVDI KDKWRNLLKA SCTQLQKERK IKRDISKQAS DHVPESVLQR VRELAVIYPY 1500 PSRKRTLRIA RTTDSQDPVR NLRLSILQQS RERRFLKMRI KREISKRASD RVPESVSQRV 1560 RELAVIYPYP RRKKVRS

Sequence ? help Back to Top

Protein Sequence Length: 1577 aa Download sequence

MISKDREQLK DLSVRVFSVL LFFSFFSLPL PRIAGQDTAS YDLATELVLS RYSNLTPVFK  60
DELQSKFSFC IVDIDEDWDG AFNFSKDSRF ISNCAKKMAG GSIGEVLGRL CTAAEIKLYS  120
EGLLHSGKTS YLKPNKNCNL SSWVSGCEPG WACGSSEKVD PKNRTYVPVR SNDCAPCCEG  180
FFCPHGLTCM LPCPKGAYCP FAKLNNETGT CEPYSYQLPP GKQNHTCGGA DKWADFSSSK  240
EAGLIFILLI IYNCSDQVLA TREKRQAKSR EKAVQSVRET AQAREKWKSA KDIAKKHAVG  300
LSSQFSRTFS RRKSTRHSDQ LKGLGQAKPG TDAALPPMPP NEQSAGTSKG KNKDKGSLTQ  360
MIHAIEEDPN SHEGFNLEIG DKNIKKQTAK APKGKQLHTQ SQIFKYAYGQ IEKEKALQEQ  420
NANLTFSGVI EMAGDTEISK RPPIEVAFKD LTLTLKGKNK HLMRCVTGKI SPGRVSAVMG  480
PSGAGKTTFL SALAGKIRGC TMSGMILVNG KMESIHSYKK IIGFVPQDDI VHGNLTVEEN  540
LWFSARCRLS ADLPKPEKVL VVERVIESLG LQAVRDSLVG TVERRGISGG QRKRVNVGLE  600
MVMEPSLLIL DEPTSGLDSS SSNLLLRALR REALEGVNIC MVVHQPSYTL FKMFDDLILL  660
AKGGLTVYHG SVKKVEEYFA TLGITVPERV NPPDYFIDIL EGIVKPSTSS GVTYKQLPVR  720
WMLHNGYPVP MDMLQSSDGM AASAGENSAH GGSTPNAGSD GQSFAGDFWQ DVKCHVEVNK  780
DTLQHNFLKS SDLSERITPG VFQQYRYFLG RGGKQRLREA RTQAVDFLIL LIAGVCLGTL  840
AKVSDETFGA IGYTYTVIAV SLLCKIAALR TFGLDKLHYW RESSSGMSSL AYFLSRDTID  900
HFNTIIKPLV YLSMFYFFNN PRSSVIDNFI VLLCLVYCVT GIAYALAIYL APGPAQLWSV  960
LLPVVLTLIA NYNENKFVSR IADLCYTKWA LEAFVIANAK RRWSWLKRNC TGVLFMASPS  1020
DLSVRTPSEI RKKKLSRQRK REELERELLD IMFQGMDNAV CHGRISLPTC QEYLWEAKHS  1080
DKVFKLEGGP DSCLQNAGLE SHSPGVYKEY CGAEMADLSC ESTPRLGYKD NRSSLLLDHM  1140
SVQKRQLVFR NMFRYETPII DKQWPKYSIS PGLQNCFELE SGSNLAECGL MTKKNEGKTV  1200
LSSSIEFFGK DTGTIEGSLS DEGMSRDLQV KWKKLADLES LKTSNSRVSE IELCSSDERD  1260
KAGAFAMQKR SRRPPRRYIE ELAQSKSKFY SRKCGVACKR SKNSFLHVRS DKNNRQKETQ  1320
EETLLCQDKS YEVGCIQVPF GLPVEAGQLE EHNSSLNSED CKEDHKLLRS SEKLEIEYSP  1380
AKSREEISDD ECVLRRSTQK GSKQIKHYTS WTSSEVMKLI EGVSQCGVGR WSAMKRLLFS  1440
SCSHRTAVDI KDKWRNLLKA SCTQLQKERK IKRDISKQAS DHVPESVLQR VRELAVIYPY  1500
PSRKRTLRIA RTTDSQDPVR NLRLSILQQS RERRFLKMRI KREISKRASD RVPESVSQRV  1560
RELAVIYPYP RRKKVRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	9e-27	MYB_related family protein