PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g344250.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1566aa MW: 175304 Da PI: 9.4673

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g344250.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.9	4.8e-08	1399	1447	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v q G g+W++ r + +Rt+ ++k++w+++l Pd.00g344250.m01 1399 SWTSSEVMKLIEGVSQCGVGRWSAMKRLLFsscSHRTAVDIKDKWRNLL 1447 6*********************888887***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1566 aa Download sequence
MISKDREQLK DLSVRVFSVL LFFSFFSLPL PRIAGQDTAS YDLATELVLS RYSNLTPVFK 60 DELQSKFSFC IVDIDEDWDG AFNFSKDSRF ISNCAKKMAG GSIGEVLGRL CTAAEIKLYS 120 EGLLHSGKTS YLKPNKNCNL SSWVSGCEPG WACGSSEKVD PKNRTYVPVR SNDCAPCCEG 180 FFCPHGLTCM LPCPKGAYCP FAKLNNETGT CEPYSYQLPP GKQNHTCGGA DKWADFSSSK 240 EAGLIFILLI IYNCSDQVLA TREKRQAKSR EKAVQSVRET AQAREKWKSA KDIAKKHAVG 300 LSSQFSRTFS RRKSTRHSDQ LKGLGQAKPG TDAALPPMPP NEQSAGTSKG KNKDKGSLTQ 360 MIHAIEEDPN SHEGFNLEIG DKNIKKQTAK APKGKQLHTQ SQIFKYAYGQ IEKEKALQEQ 420 NANLTFSGVI EMAGDTEISK RPPIEVAFKD LTLTLKGKNK HLMRCVTGKI SPGRVSAVMG 480 PSGAGKTTFL SALAGKIRGC TMSGMILVNG KMESIHSYKK IIGFVPQDDI VHGNLTVEEN 540 LWFSARCRLS ADLPKPEKVL VVERVIESLG LQAVRDSLVG TVERRGISGG QRKRVNVGLE 600 MVMEPSLLIL DEPTSGLDSS SSNLLLRALR REALEGVNIC MVVHQPSYTL FKMFDDLILL 660 AKGGLTVYHG SVKKVEEYFA TLGITVPERV NPPDYFIDIL EGIVKPSTSS GVTYKQLPVR 720 WMLHNGYPVP MDMLQSSDGM AASAGENSAH GGSTPNAGSD GQSFAGDFWQ DVKCHVEVNK 780 DTLQHNFLKS SDLSERITPG VFQQYRYFLG RGGKQRLREA RTQAVDFLIL LIAGVCLGTL 840 AKVSDETFGA IGYTYTVIAV SLLCKIAALR TFGLDKLHYW RESSSGMSSL AYFLSRDTID 900 HFNTIIKPLV YLSMFYFFNN PRSSVIDNFI VLLCLVYCVT GIAYALAIYL APGPAQLWSV 960 LLPVVLTLIA NYNENKFVSR IADLCYTKWA LEAFVIANAK RRWSWLKRNC TGVLFMASPS 1020 DLSVRTPSEI RKKKLSRQRK REELERESAM EGLVSQLVKN IFGVEAKHSD KVFKLEGGPD 1080 SCLQNAGLES HSPGVYKEYC GAEMADLSCE STPRLGYKDN RSSLLLDHMS VQKRQLVFRN 1140 MFRYETPIID KQWPKYSISP GLQNCFELES GSNLAECGLM TKKNEGKTVL SSSIEFFGKD 1200 TGTIEGSLSD EGMSRDLQVK WKKLADLESL KTSNSRVSEI ELCSSDERDK AGAFAMQKRS 1260 RRPPRRYIEE LAQSKSKFYS RKCGVACKRS KNSFLHVRSD KNNRQKETQE ETLLCQDKSY 1320 EVGCIQVPFG LPVEAGQLEE HNSSLNSEDC KEDHKLLRSS EKLEIEYSPA KSREEISDDE 1380 CVLRRSTQKG SKQIKHYTSW TSSEVMKLIE GVSQCGVGRW SAMKRLLFSS CSHRTAVDIK 1440 DKWRNLLKAS CTQLQKERKI KRDISKQASD HVPESVLQRV RELAVIYPYP SRKRTLRIAR 1500 TTDSQDPVRN LRLSILQQSR ERRFLKMRIK REISKRASDR VPESVSQRVR ELAVIYPYPR 1560 RKKVRS

Sequence ? help Back to Top

Protein Sequence Length: 1566 aa Download sequence

MISKDREQLK DLSVRVFSVL LFFSFFSLPL PRIAGQDTAS YDLATELVLS RYSNLTPVFK  60
DELQSKFSFC IVDIDEDWDG AFNFSKDSRF ISNCAKKMAG GSIGEVLGRL CTAAEIKLYS  120
EGLLHSGKTS YLKPNKNCNL SSWVSGCEPG WACGSSEKVD PKNRTYVPVR SNDCAPCCEG  180
FFCPHGLTCM LPCPKGAYCP FAKLNNETGT CEPYSYQLPP GKQNHTCGGA DKWADFSSSK  240
EAGLIFILLI IYNCSDQVLA TREKRQAKSR EKAVQSVRET AQAREKWKSA KDIAKKHAVG  300
LSSQFSRTFS RRKSTRHSDQ LKGLGQAKPG TDAALPPMPP NEQSAGTSKG KNKDKGSLTQ  360
MIHAIEEDPN SHEGFNLEIG DKNIKKQTAK APKGKQLHTQ SQIFKYAYGQ IEKEKALQEQ  420
NANLTFSGVI EMAGDTEISK RPPIEVAFKD LTLTLKGKNK HLMRCVTGKI SPGRVSAVMG  480
PSGAGKTTFL SALAGKIRGC TMSGMILVNG KMESIHSYKK IIGFVPQDDI VHGNLTVEEN  540
LWFSARCRLS ADLPKPEKVL VVERVIESLG LQAVRDSLVG TVERRGISGG QRKRVNVGLE  600
MVMEPSLLIL DEPTSGLDSS SSNLLLRALR REALEGVNIC MVVHQPSYTL FKMFDDLILL  660
AKGGLTVYHG SVKKVEEYFA TLGITVPERV NPPDYFIDIL EGIVKPSTSS GVTYKQLPVR  720
WMLHNGYPVP MDMLQSSDGM AASAGENSAH GGSTPNAGSD GQSFAGDFWQ DVKCHVEVNK  780
DTLQHNFLKS SDLSERITPG VFQQYRYFLG RGGKQRLREA RTQAVDFLIL LIAGVCLGTL  840
AKVSDETFGA IGYTYTVIAV SLLCKIAALR TFGLDKLHYW RESSSGMSSL AYFLSRDTID  900
HFNTIIKPLV YLSMFYFFNN PRSSVIDNFI VLLCLVYCVT GIAYALAIYL APGPAQLWSV  960
LLPVVLTLIA NYNENKFVSR IADLCYTKWA LEAFVIANAK RRWSWLKRNC TGVLFMASPS  1020
DLSVRTPSEI RKKKLSRQRK REELERESAM EGLVSQLVKN IFGVEAKHSD KVFKLEGGPD  1080
SCLQNAGLES HSPGVYKEYC GAEMADLSCE STPRLGYKDN RSSLLLDHMS VQKRQLVFRN  1140
MFRYETPIID KQWPKYSISP GLQNCFELES GSNLAECGLM TKKNEGKTVL SSSIEFFGKD  1200
TGTIEGSLSD EGMSRDLQVK WKKLADLESL KTSNSRVSEI ELCSSDERDK AGAFAMQKRS  1260
RRPPRRYIEE LAQSKSKFYS RKCGVACKRS KNSFLHVRSD KNNRQKETQE ETLLCQDKSY  1320
EVGCIQVPFG LPVEAGQLEE HNSSLNSEDC KEDHKLLRSS EKLEIEYSPA KSREEISDDE  1380
CVLRRSTQKG SKQIKHYTSW TSSEVMKLIE GVSQCGVGRW SAMKRLLFSS CSHRTAVDIK  1440
DKWRNLLKAS CTQLQKERKI KRDISKQASD HVPESVLQRV RELAVIYPYP SRKRTLRIAR  1500
TTDSQDPVRN LRLSILQQSR ERRFLKMRIK REISKRASDR VPESVSQRVR ELAVIYPYPR  1560
RKKVRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	8e-27	MYB_related family protein