PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g342920.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1160aa MW: 129722 Da PI: 8.6825

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g342920.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.1e-09	65	100	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g342920.m02 65 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 100 6***************99.******9.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1160 aa Download sequence
MSNCLEVPVL LKCALTPSLR TWTSSNRRAN TPPEVTKEAA SNKYEENANK TGQKKRKLSD 60 MLGPQWTKEE LENFYEAYRK YGKDWKKVAS VVRHRSVEMV EALYSMNKAY LSLPEGVASV 120 VGLIAMMTDH YCILGGSDSE QENNEDAETS RKPQKHARSK LRSESSKGLE GHIPDFSESH 180 PMASTSDCLS LLKNRRSGIR PHAVKKRTPR VPVAYSNDQD NSRKYSSPAR QGLKLNADAN 240 NNDVAHEIAL ALTEASHRGG SPLVSWTPKR KAKGTTPSPV RNGERMCAES EITNARLHGC 300 EMDEGGCELS LGSTEADNDY YDRNEKYAMG REGTGTLEVQ QRRKRYFVKK KEVDESKNKH 360 VEDIKEACSG TEEGQKLVAI KGKFDTKVVK SARSFYKDTR KKSKKALIGG DEGSPFDALQ 420 TLADLSLMMP EAADTESSAH VKEDNFNIAN KSKLKGSRPI PGVEHAAFKT SKLGKLGEGV 480 HQSNSGLQKG KQKSLSFKIY NEAQTDCYAS DNEKIEATVE VKKSASKGKR SSHYTTHPKQ 540 GKLVKKTLWN ASSTTDRKRE ENDSGLSSVQ VPSANPANLP TKNKGKWEDM QKSSIQKDTK 600 SPESILDDQP DRLVPSFRNR ELNIKEKLSS CLSRYQVRRW CAFEWFYSAI DYPWFAKREF 660 VEYLDHVGLG HVPRLTRVEW GVIRSSLGRP RRFSEQFLKE EKEKLNQYRE SVRTHYAELN 720 AGTREGLPTD LARPLSVGQH VIAFHPRARE IHNGIVLTVD HSRCSVQFDQ PELGVEYIMD 780 VDCMPLHPAE NLPASFRKHN VTVNKYIENL KELKINEQLK EGTTKGYMKI SSSDKLVKSS 840 SFNVQAKVGH GETASTQVAN YQPSIPAQTQ AKEADVQAIY ELTRALDKKE AVVSELRRMN 900 DEVFENQRDE DNSIRDSEPF KKEYAAVLLQ LSQVNDQVSS ALLCLRQRNT YRGSSPHTVV 960 KPMDNLSDPG SHSNSYGYSC DVQESASHMR EIVESSRAKA HKMVDAAMQA FSSLRKENNF 1020 DKIEEVIDFV SNRLSDDAGM LAMGSSTTPA DPIPFSQDQL TSCTSKPLAT GCAHDPPKSN 1080 NLSNQSEEKL LSDLIVNCVA AFMMIQTCTA RQFPPADVAQ VLDHAVTSLQ PFCPQNLSVY 1140 GEIQKCMGII RNQIMALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1160 aa Download sequence

MSNCLEVPVL LKCALTPSLR TWTSSNRRAN TPPEVTKEAA SNKYEENANK TGQKKRKLSD  60
MLGPQWTKEE LENFYEAYRK YGKDWKKVAS VVRHRSVEMV EALYSMNKAY LSLPEGVASV  120
VGLIAMMTDH YCILGGSDSE QENNEDAETS RKPQKHARSK LRSESSKGLE GHIPDFSESH  180
PMASTSDCLS LLKNRRSGIR PHAVKKRTPR VPVAYSNDQD NSRKYSSPAR QGLKLNADAN  240
NNDVAHEIAL ALTEASHRGG SPLVSWTPKR KAKGTTPSPV RNGERMCAES EITNARLHGC  300
EMDEGGCELS LGSTEADNDY YDRNEKYAMG REGTGTLEVQ QRRKRYFVKK KEVDESKNKH  360
VEDIKEACSG TEEGQKLVAI KGKFDTKVVK SARSFYKDTR KKSKKALIGG DEGSPFDALQ  420
TLADLSLMMP EAADTESSAH VKEDNFNIAN KSKLKGSRPI PGVEHAAFKT SKLGKLGEGV  480
HQSNSGLQKG KQKSLSFKIY NEAQTDCYAS DNEKIEATVE VKKSASKGKR SSHYTTHPKQ  540
GKLVKKTLWN ASSTTDRKRE ENDSGLSSVQ VPSANPANLP TKNKGKWEDM QKSSIQKDTK  600
SPESILDDQP DRLVPSFRNR ELNIKEKLSS CLSRYQVRRW CAFEWFYSAI DYPWFAKREF  660
VEYLDHVGLG HVPRLTRVEW GVIRSSLGRP RRFSEQFLKE EKEKLNQYRE SVRTHYAELN  720
AGTREGLPTD LARPLSVGQH VIAFHPRARE IHNGIVLTVD HSRCSVQFDQ PELGVEYIMD  780
VDCMPLHPAE NLPASFRKHN VTVNKYIENL KELKINEQLK EGTTKGYMKI SSSDKLVKSS  840
SFNVQAKVGH GETASTQVAN YQPSIPAQTQ AKEADVQAIY ELTRALDKKE AVVSELRRMN  900
DEVFENQRDE DNSIRDSEPF KKEYAAVLLQ LSQVNDQVSS ALLCLRQRNT YRGSSPHTVV  960
KPMDNLSDPG SHSNSYGYSC DVQESASHMR EIVESSRAKA HKMVDAAMQA FSSLRKENNF  1020
DKIEEVIDFV SNRLSDDAGM LAMGSSTTPA DPIPFSQDQL TSCTSKPLAT GCAHDPPKSN  1080
NLSNQSEEKL LSDLIVNCVA AFMMIQTCTA RQFPPADVAQ VLDHAVTSLQ PFCPQNLSVY  1140
GEIQKCMGII RNQIMALVPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein