PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g342920.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 1184aa MW: 132245 Da PI: 8.8518 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.2 | 2.2e-09 | 65 | 100 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g342920.m01 65 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 100 6*****************99.********9.9998766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1184 aa Download sequence |
MSNCLEVPVL LKCALTPSLR TWTSSNRRAN TPPEVTKEAA SNKYEENANK TGQKKRKLSD 60 MLGPQWTKEE LENFYEAYRK YGKDWKKVAS VVRHRSVEMV EALYSMNKAY LSLPEGVASV 120 VGLIAMMTDH YCILGGSDSE QENNEDAETS RKPQKHARSK LRSESSKGLE GHIPDFSESH 180 PMASTSDCLS LLKNRRSGIR PHAVKKRTPR VPVAYSNDQD NSRKYSSPAR QGLKLNADAN 240 NNDVAHEIAL ALTEASHRGG SPLVSWTPKR KAKGTTPSPV RNGERMCAES EITNARLHGC 300 EMDEGGCELS LGSTEADNDY YDRNEKYAMG REGTGTLEVQ QRRKRYFVKK KEVDESKNKH 360 VEDIKEACSG TEEGQKLVAI KGKFDTKVVK SARSFYKDTR KKSKKALIGG DEGSPFDALQ 420 TLADLSLMMP EAADTESSAH VKEDNFNIAN KSKLKGSRPI PGVEHAAFKT SKLGKLGEGV 480 HQSNSGLQKG KQKSLSFKIY NEAQTDCYAS DNEKIEATVE VKKSASKGKR SSHYTTHPKQ 540 GKLVKKTLWN ASSTTDRKRE ENDSGLSSVQ VPSANPANLP TKNKGKWEDM QKSSIQKDTK 600 SPESILDDQP DRLVPSFRNR ELNIKEKLSS CLSRYQVRRW CAFEWFYSAI DYPWFAKREF 660 VEYLDHVGLG HVPRLTRVEW GVIRSSLGRP RRFSEQFLKE EKEKLNQYRE SVRTHYAELN 720 AGTREGLPTD LARPLSVGQH VIAFHPRARE IHNGIVLTVD HSRCSVQFDQ PELGVEYIMD 780 VDCMPLHPAE NLPASFRKHN VTVNKYIENL KELKINEQLK EGTTKGYMKI SSSDKLVSTG 840 VPGYILPSNH RINKSSKQTG VKSSSFNVQA KVGHGETAST QVANYQPSIP AQTQAKEADV 900 QAIYELTRAL DKKEAVVSEL RRMNDEVFEN QRDEDNSIRD SEPFKKEYAA VLLQLSQVND 960 QVSSALLCLR QRNTYRGSSP HTVVKPMDNL SDPGSHSNSY GYSCDVQESA SHMREIVESS 1020 RAKAHKMVDA AMQAFSSLRK ENNFDKIEEV IDFVSNRLSD DAGMLAMGSS TTPADPIPFS 1080 QDQLTSCTSK PLATGCAHDP PKSNNLSNQS EEKLLSDLIV NCVAAFMMIQ TCTARQFPPA 1140 DVAQVLDHAV TSLQPFCPQN LSVYGEIQKC MGIIRNQIMA LVPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |