PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g339870.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 1002aa MW: 111291 Da PI: 6.7032 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 130.9 | 4.5e-41 | 142 | 219 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++lv + +qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g339870.m01 142 VCQVEDCKADLSNAKDYHRRHKVCDMHSKASTALVGNAMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 219 6**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1002 aa Download sequence |
MEAEFGGKAH SYYGMKAVGK KTFEWDLNDW KWDGDLFTAS PLNSVPSACR SKQLFPVRPE 60 IPSNAGLSNS SSSGSDNISP GNEKGKRELE KRRRAVFVEN EVRDEAGSLN LNLGGQAYPI 120 MEGEVQTGKK TKIVGTTSNR AVCQVEDCKA DLSNAKDYHR RHKVCDMHSK ASTALVGNAM 180 QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH NRRRRKTHPD TTANGGSLND ERGSSYLLIS 240 LLRILSNMHS SSSDQTKDQD LLSHLLRSLA NLAGTADGRN ISTLLQGSQG LFNSGTSVQI 300 TKVPDMDDGV NLEDLRPVGQ CSVVPASDML ERRISSVDDP GSLQVLSGLQ ATEPLPSRDS 360 SESKSVTPEA TSRRFQLNGI DLNNTYDDSQ DYLENLGNSH VPASPGTASL GFSSWMQHDS 420 HKSSPPQTSG NSDLTSTQSP SSSSGEAQSR TDRIVFKLFG KDPNDLPFIL RSQILDWLSH 480 SPTDIESYIR PGCIILTIYL RLEKSTWEEL CCHLGSSLKT LLDAADDPFW RTGWVYTRVQ 540 HFVAFTYNGQ VVLDTPLPLK SDKSCRISYI KPIAVSVSER AQFVVKGFNL SHSATRLLCA 600 LEGKYLVQET CYDMMDGVHT TVEHDELQCL KFSCSIPDVT GRGFIEVEDH GLSSSFFPFI 660 VAEQEVCSEI CMLEGEIEVA ESADAEKLEA KNQALDFIHE LGWLLHRSRA KFRLGHSDPN 720 LDLFPFSRFR LLMEFSIEHD WCVVVKKLLG ILFEGTVDAG EHTSVEFALL DMSLLHRAVR 780 RNCRSMVEFL LKFIPNQGLT GSEQKQQVDR DGNSFLFKPD AVGPMGLTPL HVAASADGYE 840 HVLDALTDDP GKLGIEAWKN ARDSTGLTPY DYACLQSRYS YVHLVQRKIS KTLESGQVVL 900 DIPGVILDRN GKQKQSEAYK PSRVASLETE KIEMKAILRH CKLCAQKPAY GNTRSLVYRP 960 AMLSMVAVAA VCVCVALLFK STPEVLFVFQ PFRWELLKFG SS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 91 | 132 | KRRRAVFVENEVRDEAGSLNLNLGGQAYPIMEGEVQTGKKTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47070.1 | 0.0 | SBP family protein |