PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g339870.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 1002aa    MW: 111291 Da    PI: 6.7032
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g339870.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP130.94.5e-41142219178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +Cqve+C+adls+ak+yhrrhkvC++hska+++lv + +qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++
  Pd.00g339870.m01 142 VCQVEDCKADLSNAKDYHRRHKVCDMHSKASTALVGNAMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 219
                       6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1002 aa     Download sequence    
MEAEFGGKAH SYYGMKAVGK KTFEWDLNDW KWDGDLFTAS PLNSVPSACR SKQLFPVRPE  60
IPSNAGLSNS SSSGSDNISP GNEKGKRELE KRRRAVFVEN EVRDEAGSLN LNLGGQAYPI  120
MEGEVQTGKK TKIVGTTSNR AVCQVEDCKA DLSNAKDYHR RHKVCDMHSK ASTALVGNAM  180
QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH NRRRRKTHPD TTANGGSLND ERGSSYLLIS  240
LLRILSNMHS SSSDQTKDQD LLSHLLRSLA NLAGTADGRN ISTLLQGSQG LFNSGTSVQI  300
TKVPDMDDGV NLEDLRPVGQ CSVVPASDML ERRISSVDDP GSLQVLSGLQ ATEPLPSRDS  360
SESKSVTPEA TSRRFQLNGI DLNNTYDDSQ DYLENLGNSH VPASPGTASL GFSSWMQHDS  420
HKSSPPQTSG NSDLTSTQSP SSSSGEAQSR TDRIVFKLFG KDPNDLPFIL RSQILDWLSH  480
SPTDIESYIR PGCIILTIYL RLEKSTWEEL CCHLGSSLKT LLDAADDPFW RTGWVYTRVQ  540
HFVAFTYNGQ VVLDTPLPLK SDKSCRISYI KPIAVSVSER AQFVVKGFNL SHSATRLLCA  600
LEGKYLVQET CYDMMDGVHT TVEHDELQCL KFSCSIPDVT GRGFIEVEDH GLSSSFFPFI  660
VAEQEVCSEI CMLEGEIEVA ESADAEKLEA KNQALDFIHE LGWLLHRSRA KFRLGHSDPN  720
LDLFPFSRFR LLMEFSIEHD WCVVVKKLLG ILFEGTVDAG EHTSVEFALL DMSLLHRAVR  780
RNCRSMVEFL LKFIPNQGLT GSEQKQQVDR DGNSFLFKPD AVGPMGLTPL HVAASADGYE  840
HVLDALTDDP GKLGIEAWKN ARDSTGLTPY DYACLQSRYS YVHLVQRKIS KTLESGQVVL  900
DIPGVILDRN GKQKQSEAYK PSRVASLETE KIEMKAILRH CKLCAQKPAY GNTRSLVYRP  960
AMLSMVAVAA VCVCVALLFK STPEVLFVFQ PFRWELLKFG SS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
191132KRRRAVFVENEVRDEAGSLNLNLGGQAYPIMEGEVQTGKKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47070.10.0SBP family protein