PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g339860.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 1036aa MW: 115187 Da PI: 7.3995

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g339860.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.7	9.2e-40	147	224	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++ v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g339860.m01 147 VCQVEDCKADLSHAKDYHRRHKVCDMHSKATKARVGNVLQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 224 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1036 aa Download sequence
MEAFGGSARN FYGPMVSDLK AVGKKSLEWD LNDCKWDGDL FTASPLNSIP SDFRSRQLFP 60 VQPETPSNAG LSNSSSSGSD DISPGNEKGK RELEKRRRAT FVENEELNNE AGSLNLKLGE 120 QAYPIMEGEV QTGKKTKIVG TTLNRAVCQV EDCKADLSHA KDYHRRHKVC DMHSKATKAR 180 VGNVLQRFCQ QCSRFHVLQE FDEGKRSCRR RLAGHNRRRR KTHPDPVVNG GSLNDERGSS 240 YLLISLLRIL SNMQSNSSDQ TKDQDQDLLS HLLRSLANLA GTVDGRSISA LLPGSQGLLN 300 SGPSVQTAQK VPDTVSNGCE PSRPSVSASK RDDCVNLEDP LRPIRQCPTV PASDLLQKRI 360 SSVDADHRSL QVVSGIQAAK PLPSRDSVPS KSVAPDATMG RMQLNGIDLN NTYDDSQDYL 420 ENLGSSHSPV NPGTVSLGFP LWMQQESQKS SPPQTSGTSD STSTQSPSTS SGEGQSRTDR 480 IVFKLFGKDP NDLPFVLRSQ ILDWLSHSPS DIESYIRPGC IILTIYLRLE KSTWEELCCH 540 LGSNLKRLLH AANDPFWTTG WVYTRVQQNV AFTYNGQVVL DTPLPLKSHK NCRISYIKPI 600 AVSLSERAQF VVKGFNLSRS TTRLLCALEG KYLAQETCYD LMDSADTTVE HDEQHCLRFS 660 CSIPNVTGRG FIEVEDHGLS SSFFPFIVAE QEVCSEICML EGAIEVAETA DDIQREPKKL 720 EAKNLAMDFI HELGWLLHRS HTKFRLGHMD PNLDLFPFRR FRLLMEFSMD HDWCAVVKKL 780 LGILFEGNVD AGEHPSIELG LLDMSLLHRA VRRKCRSMVE LLLRFVPDKG LDKTGSEQKQ 840 QVDRDVNNFL FKPDAVGPMG LTPLHVAAST DGCEIILDAL TDDPGKVGIE AWKYARDSTG 900 LTPNDYACLR GRYSYLHIVQ RKISKKLESG QVVLDIPGTI LDSNSKQKQS DGHKSSKVAS 960 LETEKIEIKA MQGHCKLCEM KLAYGNTRSL VYRPAMLSMV AIAAVCVCVA LLFKSSPEVV 1020 YVFQPFRWEL LKYGPS

Sequence ? help Back to Top

Protein Sequence Length: 1036 aa Download sequence

MEAFGGSARN FYGPMVSDLK AVGKKSLEWD LNDCKWDGDL FTASPLNSIP SDFRSRQLFP  60
VQPETPSNAG LSNSSSSGSD DISPGNEKGK RELEKRRRAT FVENEELNNE AGSLNLKLGE  120
QAYPIMEGEV QTGKKTKIVG TTLNRAVCQV EDCKADLSHA KDYHRRHKVC DMHSKATKAR  180
VGNVLQRFCQ QCSRFHVLQE FDEGKRSCRR RLAGHNRRRR KTHPDPVVNG GSLNDERGSS  240
YLLISLLRIL SNMQSNSSDQ TKDQDQDLLS HLLRSLANLA GTVDGRSISA LLPGSQGLLN  300
SGPSVQTAQK VPDTVSNGCE PSRPSVSASK RDDCVNLEDP LRPIRQCPTV PASDLLQKRI  360
SSVDADHRSL QVVSGIQAAK PLPSRDSVPS KSVAPDATMG RMQLNGIDLN NTYDDSQDYL  420
ENLGSSHSPV NPGTVSLGFP LWMQQESQKS SPPQTSGTSD STSTQSPSTS SGEGQSRTDR  480
IVFKLFGKDP NDLPFVLRSQ ILDWLSHSPS DIESYIRPGC IILTIYLRLE KSTWEELCCH  540
LGSNLKRLLH AANDPFWTTG WVYTRVQQNV AFTYNGQVVL DTPLPLKSHK NCRISYIKPI  600
AVSLSERAQF VVKGFNLSRS TTRLLCALEG KYLAQETCYD LMDSADTTVE HDEQHCLRFS  660
CSIPNVTGRG FIEVEDHGLS SSFFPFIVAE QEVCSEICML EGAIEVAETA DDIQREPKKL  720
EAKNLAMDFI HELGWLLHRS HTKFRLGHMD PNLDLFPFRR FRLLMEFSMD HDWCAVVKKL  780
LGILFEGNVD AGEHPSIELG LLDMSLLHRA VRRKCRSMVE LLLRFVPDKG LDKTGSEQKQ  840
QVDRDVNNFL FKPDAVGPMG LTPLHVAAST DGCEIILDAL TDDPGKVGIE AWKYARDSTG  900
LTPNDYACLR GRYSYLHIVQ RKISKKLESG QVVLDIPGTI LDSNSKQKQS DGHKSSKVAS  960
LETEKIEIKA MQGHCKLCEM KLAYGNTRSL VYRPAMLSMV AIAAVCVCVA LLFKSSPEVV  1020
YVFQPFRWEL LKYGPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein