PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g338300.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 251aa MW: 27766.7 Da PI: 4.8493 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d + ++ r +lg+f taeeAa+a+++a+ l+g Pd.00g338300.m01 42 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 91 799******.7*********32...35**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MEFQFQQQNQ ICFPAAANKA VGIPMSKVGT SKGRTRSNNT NKFVGVRQRP SGRWVAEIKD 60 TTQKIRMWLG TFETAEEAAR AYDEAACLLR GSNTRTNFIT HVSLDSPLAS RIRNLLSTKK 120 GGSSKQVTEQ TSPSIADHDD MNASHPPTSS TTSSDNGSDT LSSEVFEDSQ LFDDVYRPDL 180 RHCNEEFELS SSASQSNLSW GGFEPGVDGM KVERQISASL YAMNGVQEYM DTVYDPNEPS 240 WDLPPLCPLF C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-29 | ERF family protein |