PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g338290.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 312aa    MW: 35120.9 Da    PI: 9.9115
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g338290.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-1877126255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Pd.00g338290.m01  77 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 126
                       799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
LIEAKVVHDQ LCSMVERSDR ELLGPNNQYL PKIVAVFAEF QQQNQICFPA AANKAVGIPM  60
SKVGTSKGRT RSNNTNKFVG VRQRPSGRWV AEIKDTTQKI RMWLGTFETA EEAARAYDEA  120
ACLLRGSNTR TNFITHVSLD SPLASRIRNL LSTKKGGSSK QVTEQTSPSI ADHDDMNASH  180
PPTSSTTSSD KYMTNIISTA STMDELERRF GSRLRLSEKE RVGIQIAEEE CGDFWKGSQF  240
TMVARVLTNR AVHRDGFISV FSRLWRGVDG VSIKEIGDRR FLVRFANKQD KLRVLDMEPW  300
TFRESLVILV ET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-29ERF family protein