PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g336210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 279aa MW: 30886.6 Da PI: 6.1689 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.4 | 5.7e-19 | 25 | 75 | 1 | 52 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvk 52 lppGfrFhPtdeelvv+yLkkkv++ +l++ +i+ev++yk++Pw+Lp+k++ Pd.00g336210.m01 25 LPPGFRFHPTDEELVVHYLKKKVSSAPLPV-AIIAEVELYKFDPWELPAKAT 75 79****************************.88***************5443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MESTDSSTGS QQQKQQPQPP PQPNLPPGFR FHPTDEELVV HYLKKKVSSA PLPVAIIAEV 60 ELYKFDPWEL PAKATNKPPG CDLGNKKNSL RLDDWVLCRI YKKNNSHRPM DLEREDSMED 120 MMGPLMPPSI SHVGHHQNMN LHLPNSNTNY GPPFIENDQI IFDGIMSSTD GSASLSNGTS 180 QLPLKRSIVP SLYWNDQEDD RTAGASSSKR VVQLHQLDSG TNNSVAANNN STSIANLLSQ 240 LPQTPPLHQH AMLGSLGDGL FRTPYQLPGM NWFSESNLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 5e-29 | NAC family protein |