PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g335330.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 920aa MW: 101054 Da PI: 7.1619 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.8 | 8.6e-18 | 371 | 470 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e Pd.00g335330.m02 371 FEKMLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PE 461 89**************************555567778***************9989999999***9.********************876.77 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++l +++++ Pd.00g335330.m02 462 GKLIMGFRK 470 777777766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 920 aa Download sequence |
MSSVSQFCGL HPSVFSQSVR CPLSFTPRSG SGFGVSCELE NLSAKMEPRT CMNAACGTSS 60 SIEWKKGWAL RSGGFANLCL KCWSAYEQSI FCDIFHSKES GWRECILCGK RLHCGCIASM 120 FLLDLLDGGG VKCIKCAKSS EPQPILSDEK PDGLGISKIS ELQPTAQDNQ LDGTNVEKLK 180 LIQLGNNKDC NGFRNLLQLQ NNDANGLLQK MKHADTPPPV GEIGGTCLSN FNLASNGSSE 240 APKAEVFKAN LGINDIYDSL PQTNLSMSLG APLGKANPVP AAMFDEREHS KTSSPLLPGA 300 RSRNLFPKPP KLALGAGLEE NSTIASHARV ARPPAEGRGR NQLLPRYWPR ITDQELQQIS 360 GDSNSTIVPL FEKMLSASDA GRIGRLVLPK ACAEAYFPPI SQPEGLPLRI QDVKGKEWVF 420 QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRMDP EGKLIMGFRK ASNSVAMQDT 480 HLTAIHNGAH SSETFFSGVF ENLPVISGYP GLLQSLKGSM DPHLNALSKH LTTASGDISW 540 HKSEKQEGRT REGMLLPSLL VPERKRTRNI GSKSKRLLID SQDALELKLT WEEAQDLLRP 600 PPAAKPSTIM IEDLEFEEYE EPPVFGKRSI FIVRSTGEHE QWAQCDSCSK WRRLPVDVLL 660 PSKWTCADNA WDQSRRSCSA PDELAPRELE SFLRMSKEFK KRRTVADNRP TQEHESSGLD 720 ALANAAILGD NAADPGTASV ATTTKHPRHR PGCSCIVCIQ PPSGKGKHKP NCTCNVCNTV 780 KRRFKTLMIN KKKRQSEREA EIAYRNQHAW GPRDEAEVDS TSRHVSSHVD PSDNEARSAN 840 ESDSKSQSKV AETGKGILDL NCHPGREGEL QAGPNHATSS TSHVPPQATN ESEDQHNENQ 900 CQEQESGGEE RPDQGQDDPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 0.0 | B3 family protein |