PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g333540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SRS
Protein Properties Length: 389aa    MW: 43289.9 Da    PI: 8.5564
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g333540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70227.49.7e-095692540
            DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv.k 40
                      + +C++CGn a+  C +e C+ CC      C+ hv k
  Pd.00g333540.m01 56 KPKCKQCGNVARSRCPYESCKSCCSKAQNPCHIHVlK 92
                      569*******************************934 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MAATAPSPSP ALSSTSSGAT PSTAATTATA AVPAVAPFQT VHRTDTPPKT LRGLNKPKCK  60
QCGNVARSRC PYESCKSCCS KAQNPCHIHV LKSNATFPDK APTSSSPLFD HQSIEASPSG  120
NSHRVASLRQ LSNNFAQFNN VHLPLRSRKP LTKKDAVAIN EWRFSKLKEY KDRNIEVENE  180
AFDRYMQNVT LLEEVFSVKS IMEESIGDEA ELKSISTDNS TTATTEEDTE AMVSGLKLKL  240
RSNPMRTNNF RKRIQQVVDE GLKKLKKREL DDGEKEPIVG TGLDPGPKER EKWRAERASA  300
LGDLIDKLNK ARNEEDLKLC LEMKSQLFKE HKLTSTSESE EKQATKNILE PRKESNYSFP  360
KVVSTTEIDQ EILNIVYTHF SSLEHIQGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.11e-103SRS family protein