PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g332710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 327aa    MW: 36943.4 Da    PI: 4.35
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g332710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.86.9e-12161204654
                       HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                        ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Pd.00g332710.m01 161 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 204
                       589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MNEFLSSSGS WGNFGYLDQN PPTFFPNSSC TQEFSPPFEP NLSNCYNNNN TTFNEVYYPL  60
GFGAGEDGLS AQQQLTDSSY NTLDTPPFPV QEDNPWSMLE EEELGLLGDE IHNLETQAEA  120
ACKMEPIQSP DQVPVFNMGM CEERNNRGNS KKLQGQPSKN LMAERRRRKR LNDRLSMLRS  180
IVPKISKMDR TSILGDTIDY MKELLERINN LQQEIETDAD QLNVMSLFKD VKPNEMLVRN  240
SPKFDVQRRN VDTRIDICCA GKPGLLLSTV STLEALGLEI QQCVISCFND FAMQASCSED  300
FDQRTTVTSE DIKQALFRNA GYGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164171ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-89bHLH family protein