PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g331470.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 976aa MW: 109542 Da PI: 7.3617 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 53.7 | 3.6e-17 | 704 | 753 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f+ Lr+l+Pk+ ++K +Ka+ L +++eYI+ Lq Pd.00g331470.m01 704 RSKHSETEQRRRSKINERFQMLRDLIPKN----DQKRDKASFLLEVIEYIQFLQ 753 899*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 976 aa Download sequence |
MVFKSKMKWV GLLGLVLSAI SLFVHFLLAR FTEGGVSEYH SSITIFPRRT IGESLNFSKT 60 SPMYRRLWGP VRHLESLHPN ANPRGHYADP GSDTSGFIFV RIQGGFHEIR NSICDVVVVA 120 RFLNATLVIP EIQSTTSSKG ISSQFKSFAY LYNEDQFMAA LSKDVKVVKT LPKNLKGLRR 180 NKNIPVFKVP YSASPYYYKH HVLPILKKHL VVELVVSDGG CLQAILPPDL EECQRLRCRV 240 AFHALRFRQE VQELATEILH RLRAPGQPFI AFDPGMTREA LAYHGCAELF QDVHTELIQH 300 KRHWMIKRGI VKGKLLVNSA EQRLNGSCPL MPEEIGIVLR AYGYLWDTII YVSGGEIFGG 360 QRTLIPLRAM FENVVDRTSL SMPWELSRIY GREANLVDRN PGSPPMIEEE MKIEAWKTAG 420 PRPRPLPPPP ARPKSYNIEG WWGWVAESDN EPDSTVMELR TNAHKLLWEA IDYVICVEAD 480 VFIPGFDLDG KGHPNFASLV MGHRLYQSAA SKTYRPDRKK ITKLLEEIRN HLYHANHTWL 540 MSVRKNLRKR LVDGLIEASA RSKPLSFISH PVPECSCLRH DPVGKSINAT TSDRTSTSTS 600 HSQVLAALGV VHYCPAWMEN DLLLQSKDKE NEETLDEDDS TSSGLFFRKN NGFHEGGNGD 660 LSNKEETQLE DQEELEGGER NEANNELIGN LAVKVEGQGR EKNRSKHSET EQRRRSKINE 720 RFQMLRDLIP KNDQKRDKAS FLLEVIEYIQ FLQEKVNLYE GYQGWSPEPT KLMPWKNHNR 780 PGENFVDQSQ VMNNGSGHEN NAVVSPAMLP NTHNSVESDL GSGVVYKALD HIPGLATRSV 840 PNVQQQNIFD PIGSVGLPTQ PLQESISDAE NMTSNPPYQL WQGITSTTAS DDKLKKQDEN 900 SGSGSISSAY SQGVLNNLTQ ALQSSGVDLS QASISVQINV GSRVDSGLTS MASSSKAQLN 960 QSFLEQSNDT DPSKQL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 892 | 897 | DKLKKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 6e-47 | bHLH family protein |