PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g328350.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 261aa MW: 29824.1 Da PI: 7.1991 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.6 | 2.1e-18 | 43 | 95 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe+ +++ e++ +LAk lgL+ rq+ +WFqNrRa++k Pd.00g328350.m01 43 KKRLNLEQVKTLEKSFEMGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWK 95 4568889*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130 | 9.6e-42 | 41 | 131 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekk+rl+ eqvk+LE+sFe+ +kLeperK++la++Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lk+++dalk++n+ L++++++L++el Pd.00g328350.m01 41 EKKKRLNLEQVKTLEKSFEMGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKKKFDALKADNDVLQDHNNKLQAEL 131 69**************************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MMKRSLSFSG VENNKCHHHE EVGLHGGGED DLSDDGSQIG EKKKRLNLEQ VKTLEKSFEM 60 GNKLEPERKM QLAKALGLQP RQIAIWFQNR RARWKTKQLE KDYDVLKKKF DALKADNDVL 120 QDHNNKLQAE LLSMKSKDSN EAGLNNINNL KKETDQGSWS NGSENSSDHH HHHLNLDISR 180 TPATTNSSPS NSQQTNGKNL FPSSLRPTSI TQLLQGSSRS DLQCLKVDQM IQDESLCSMF 240 NGIDQEQQQG YWPWPEQHHF H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 90 | 98 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15150.1 | 1e-66 | HD-ZIP family protein |