PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g328260.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 421aa    MW: 45432.6 Da    PI: 8.1084
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g328260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.76.7e-30130189159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dg++WrKYGqK  kg+++pr+YYrCt a  Cpv+k+v+r+ ed +++++tYeg+Hnh+
  Pd.00g328260.m01 130 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCYEDMSILITTYEGTHNHP 189
                       58***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
MLVFIESKNP ISSSLCLGRS PRDPKNDETN TTNFTKLVQV DHEDLNANLT LGLGNSKLME  60
LPMELVRSQK PQETSLEEPK DHSEAGAGES LPPSSKTPKT TRNEDDEVPQ QANAKRARVS  120
VRVRCDTPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP ACPVRKQVQR CYEDMSILIT  180
TYEGTHNHPL PFTASSMAST TAAAASMLLS GSSTSQPGFG STATLLNGSD FGVFDSSRTN  240
QLYLPKSSNP LLPTITLDLT ASPSSSPIHL NRLSSSFASA CTFPSSLSFC SSESNISPNS  300
RGNGYLKYGS LPFDKGSFNL DQPYAEKNHQ SSSQVSLTES LTKAITSDPN FKSVIAVALS  360
SMVGGGAATH QNQGEGERLG HHLKWSEAAH QFTSHNPLIQ NGKGCSTPSI FNRLSSSDSQ  420
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.18e-72WRKY family protein