PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g328260.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 421aa MW: 45432.6 Da PI: 8.1084 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.7 | 6.7e-30 | 130 | 189 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+ ed +++++tYeg+Hnh+ Pd.00g328260.m01 130 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCYEDMSILITTYEGTHNHP 189 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 421 aa Download sequence |
MLVFIESKNP ISSSLCLGRS PRDPKNDETN TTNFTKLVQV DHEDLNANLT LGLGNSKLME 60 LPMELVRSQK PQETSLEEPK DHSEAGAGES LPPSSKTPKT TRNEDDEVPQ QANAKRARVS 120 VRVRCDTPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP ACPVRKQVQR CYEDMSILIT 180 TYEGTHNHPL PFTASSMAST TAAAASMLLS GSSTSQPGFG STATLLNGSD FGVFDSSRTN 240 QLYLPKSSNP LLPTITLDLT ASPSSSPIHL NRLSSSFASA CTFPSSLSFC SSESNISPNS 300 RGNGYLKYGS LPFDKGSFNL DQPYAEKNHQ SSSQVSLTES LTKAITSDPN FKSVIAVALS 360 SMVGGGAATH QNQGEGERLG HHLKWSEAAH QFTSHNPLIQ NGKGCSTPSI FNRLSSSDSQ 420 K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 8e-72 | WRKY family protein |