PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g328210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 272aa MW: 30153.8 Da PI: 4.8525 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.7 | 5.8e-13 | 65 | 108 | 8 | 55 |
AP2 8 wdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g Pd.00g328210.m01 65 YHH-NGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 108 566.8******99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MASLILGALS IPTQTLAFSS RISFSQSETL STSLPSSTAT IPSVPSGAIR KPKEENVSIT 60 LMALYHHNGR WEARIGRVFG NKYLYLGTYS TQEEAARAYD IAAIEYRGIN AATNFDLSSY 120 IRWLKPTADA PIATQEPETV AEPQNMPFMA NSYIPTEESF SHTNPFASDY LNSQPKTRSH 180 RELVQQNSNF SEDESADGEE TKDLPQVGSD DEFGGISMME SETTRLLARP ILMEIPTHGA 240 ALQAPFCSIN QQKQMPQTLY FSFLRCVMGN RT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.2 | 1e-25 | ERF family protein |