PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g328190.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 395aa MW: 44597.1 Da PI: 7.6451

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g328190.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.5	2.4e-11	70	126	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g Pd.00g328190.m01 70 SRFRGVSRHRWTGRFEAHLWDkLSWNVtqKKKGKQ-GAYDEEESAARAYDLAALKYWG 126 789****************88887784446666.9*****************98 PP
2	AP2	52.4	1.4e-16	169	220	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g Pd.00g328190.m01 169 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 220 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MELMMVKNEE NPGRRRQSTA DRETEATRSV KRRRRDPPAV AVSCDNKQSE QQLPQKPADP 60 TSATTMKRSS RFRGVSRHRW TGRFEAHLWD KLSWNVTQKK KGKQGAYDEE ESAARAYDLA 120 ALKYWGTSTF TNFPISDYEK ETEIMQTVSK EEYLASLRRK SSGFSRGVSK YRGVARHHHN 180 GRWEARIGRV FGNKYLYLGT YSTQEEAARA YDIAAIEYRG INAVTNFDLS SYIRWLKPTA 240 DDPIATQEPE TVAEPQNMPF MANSYISPGE SFSHTNPFAS DYFTSPRKQE VIGSKSSSPT 300 ALGLLLQSSI FRELVQKNSN FSEDESTDGG ETKNRPQVDS DDEFGGIFYD GIGNNPFDCS 360 SNSDGDNNPW SSITSTILLN QPTKANASDS LFFFS

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MELMMVKNEE NPGRRRQSTA DRETEATRSV KRRRRDPPAV AVSCDNKQSE QQLPQKPADP  60
TSATTMKRSS RFRGVSRHRW TGRFEAHLWD KLSWNVTQKK KGKQGAYDEE ESAARAYDLA  120
ALKYWGTSTF TNFPISDYEK ETEIMQTVSK EEYLASLRRK SSGFSRGVSK YRGVARHHHN  180
GRWEARIGRV FGNKYLYLGT YSTQEEAARA YDIAAIEYRG INAVTNFDLS SYIRWLKPTA  240
DDPIATQEPE TVAEPQNMPF MANSYISPGE SFSHTNPFAS DYFTSPRKQE VIGSKSSSPT  300
ALGLLLQSSI FRELVQKNSN FSEDESTDGG ETKNRPQVDS DDEFGGIFYD GIGNNPFDCS  360
SNSDGDNNPW SSITSTILLN QPTKANASDS LFFFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	35	RRRQSTADRETEATRSVKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	4e-91	AP2 family protein