PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g325270.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 330aa    MW: 36559.2 Da    PI: 8.7477
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g325270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1322e-41175252178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l efD++krsCrrrLa+hn+rrrk+q+
  Pd.00g325270.m01 175 RCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVIANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQ 252
                       6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MLDYEWGNPS TVMLSPDNDP GSDPTRHHHN TTTIFDHYAS QASQASQASA FNNLVPPPPP  60
PQQQSHHAAF AHHFNSAQAQ QLHSIYDAHA YASASAYAPP NHHPLLSLDP IHGGAAHGLI  120
LVPKSEDLCR PVDFASRIGL NLGGRTYFSS EDDFMNRLYR RTRPATETGS NHAPRCQAEG  180
CTADLSHAKH YHRRHKVCEF HSKASTVIAN GLTQRFCQQC SRFHLLPEFD NGKRSCRRRL  240
ADHNRRRRKT QQTNQENHNL QVQQLVENAR NSSSDNVARS PPESAAHSAS SVTVALSPPR  300
MTLDCFRQRP YQAAATTSSG SSSSLFFSSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.15e-56SBP family protein