PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g325270.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 330aa MW: 36559.2 Da PI: 8.7477 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132 | 2e-41 | 175 | 252 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l efD++krsCrrrLa+hn+rrrk+q+ Pd.00g325270.m01 175 RCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVIANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQ 252 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MLDYEWGNPS TVMLSPDNDP GSDPTRHHHN TTTIFDHYAS QASQASQASA FNNLVPPPPP 60 PQQQSHHAAF AHHFNSAQAQ QLHSIYDAHA YASASAYAPP NHHPLLSLDP IHGGAAHGLI 120 LVPKSEDLCR PVDFASRIGL NLGGRTYFSS EDDFMNRLYR RTRPATETGS NHAPRCQAEG 180 CTADLSHAKH YHRRHKVCEF HSKASTVIAN GLTQRFCQQC SRFHLLPEFD NGKRSCRRRL 240 ADHNRRRRKT QQTNQENHNL QVQQLVENAR NSSSDNVARS PPESAAHSAS SVTVALSPPR 300 MTLDCFRQRP YQAAATTSSG SSSSLFFSSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 5e-56 | SBP family protein |