PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g323170.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 324aa MW: 36497 Da PI: 4.2003 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.2 | 5.1e-15 | 26 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ ++++++ +G++ W++Ia+ ++ gRt++++k+ w+++l Pd.00g323170.m01 26 RGNFTREEEDSIIRLHEAWGNK-WSKIASQFP-GRTDNEIKNVWNTHL 71 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MINCLLRCGK SCRLRWINYL RPDLKRGNFT REEEDSIIRL HEAWGNKWSK IASQFPGRTD 60 NEIKNVWNTH LKKKLGFKNS EFCGDESKEL SSITSSSSSS SSSASILSGG NPSVAGELEH 120 QSADQETSMA NNNPHHDPCI LTIPEELDLD SPMELINEFR PDPKDLKELT SSSVSSNESN 180 GSSSSQLDIS IPSEEQMDFL FDFSDPNYDI PLEPDSDFWN MFDGFVPFQS NEVQLNQAEA 240 CKSSNYGQHE NEKWLSYLES ELGLDQPTAD STGHEFLAQV TTGQLLPETF QCDKMPNPAA 300 EFDQSLDYFQ MWPSLPHNNN VTDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12820.1 | 3e-40 | MYB family protein |