PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g322150.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 503aa MW: 56008.4 Da PI: 4.5193 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 114.1 | 9e-36 | 21 | 112 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++++ ++sws+ +nsfvv++ ef++++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll Pd.00g322150.m01 21 FLNKTYDMVDDPSTNAVVSWSNGNNSFVVWNVPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLL 104 9****************************************************************999.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 +++ r+k Pd.00g322150.m01 105 KTVSRRKP 112 *****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 503 aa Download sequence |
MEGVEDAATM INLANTPPPP FLNKTYDMVD DPSTNAVVSW SNGNNSFVVW NVPEFSRDLL 60 PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ KHLLKTVSRR KPAHAHSHQQ 120 APPQVQSSQV GASVEVGNLE LEEEVERLKN DKNSLMQELV RLRQKQQATD NQLHNVGQRV 180 QGMEQRQQQM MSFLAKAMHS PGFLSQLVQH QNENNRRITG SNKKRRLPRQ EDEILVGKLS 240 TKSLDGQMVK YQPSMNEAAK AMLRQILKMN TSPRLEPSIN PDAFLIDNVP SSDALESGDT 300 SNRILGVTFS EVPPTSAECY MPEEESGFPN SCHSTAISEI QCSPYAVTNC VKAAQVLEEN 360 MHNFQEDAVT PESTQMQGGV PESTVEIPNA NFMSSETGNA EYMDMSAVLD GTLPTETDAF 420 SPEPDVDALL GSSLPGITDI FWEQFLPASP LTGDVDEINL SSTDGGTTDQ ELKLTEENGW 480 DKTQHMNDIT EQMELLAPGS RIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16820.2 | 1e-123 | HSF family protein |