PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g318660.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 26336.2 Da PI: 10.0255 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.5 | 0.00058 | 96 | 116 | 35 | 55 |
TS-STCHHHHHHHHHHHHHHH CS HLH 35 skKlsKaeiLekAveYIksLq 55 ++K s ae +Av+YIk+Lq Pd.00g318660.m01 96 QGKRSLAEHMNEAVNYIKHLQ 116 5799999*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDVGMFNNIN TGGQQRKSSL ALTLDSAENQ DKSNDDGKKK MMHREIEKKR RQEMAAKKKK 60 WPPFMHHLDP YSLSNTSRFL IYISALDYIL FVEYFQGKRS LAEHMNEAVN YIKHLQTRIK 120 VLGRRRDELK IGTSSLPSLS ASSSTSSTSP RVAVHPCFGG VEIVISRGGS VEQGLVLSRL 180 LKILLGQGLI VISCATTQVN ERLVYTIQSE VSDPAWGDFS GLQQILTESL TRFSN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 60 | KKKMMHREIEKKRRQEMAAKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 8e-36 | bHLH family protein |