PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g318500.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 837aa MW: 91028.2 Da PI: 6.9373

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g318500.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.9	1.8e-34	85	155	3	73
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai ++tgt++ +a ++ Pd.00g318500.m01 85 AAKRSSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIMQATGTGTVPAIAV 155 5799***********************************************************77777433 PP

Sequence ? help Back to Top
Protein Sequence Length: 837 aa Download sequence
MEPNQRQSLE ESNELEQHSN SSSNDNTTSA SDPSVADPPE KIFPLTAPTM KEELTDTVQE 60 LDEGSLPMGL IQVPVPTSSE KQVVAAKRSS KDRHTKVEGR GRRIRMPATC AARIFQLTRE 120 LGHKSDGETI RWLLEHAEPA IMQATGTGTV PAIAVSVGGT LKIPTTSPAR PNGEITEIPR 180 KRRKRGSNSE FVDVHEQSSV SSGLAPMSYG GDGGGAHGLV PMWQVGATGA AGPFFMFPNN 240 GAMNPNQPQL WAVPAADAAT PIFNFQARPI SNFLSAFQPG VHVVGGDVQL QASSGSLSSG 300 ATSADMMSSN MHSLKWVLLD LIDRCSGFSC FKQIHAQIVT SGLACNDLVA NNVVGFLGKN 360 VNSVDYACDF LKQVDWRVSS FPFNKLISGY ANGDKPGAAV LVYRRILRDG FVPDLYTVPA 420 VLKSCVKFLG KGEGRQVHGV VVKMGFQCDV YAQNSLVHFY SVCGDCGGAI RVFDEMPVKD 480 VVSWTGLISG HVKAGLFDEA ISLFFRMDVK PNVATFVSVL VACGRMGYLR VGKGIHGLIF 540 KRSLGIEPDK IILASVLSAC ASLGALDYGR WVHEYIDRRG IKWDIHIGTS LIDMYAKCGC 600 IKMALQTFNE LPCGNVSTWN ALLGGLAMNG NGHEALQNFE EMTKAGTRPN AVTFLAILTA 660 CCHSGLVDEG RGYFYQMISQ PYNLSPRLEH YGCMVDLLCR AGLVDEAWEL INTMPMQPDV 720 LIWGALLSAY KAKGDVELSQ EILDRLLQLK LHDSGVYVLL SNIYATNERW ADVTRVRRLM 780 KKKGIQKSPG SSVIEVDGKA HEFLVGDTSH PQHEDIHVLL NILANQVYLE GIFPIHS

Sequence ? help Back to Top

Protein Sequence Length: 837 aa Download sequence

MEPNQRQSLE ESNELEQHSN SSSNDNTTSA SDPSVADPPE KIFPLTAPTM KEELTDTVQE  60
LDEGSLPMGL IQVPVPTSSE KQVVAAKRSS KDRHTKVEGR GRRIRMPATC AARIFQLTRE  120
LGHKSDGETI RWLLEHAEPA IMQATGTGTV PAIAVSVGGT LKIPTTSPAR PNGEITEIPR  180
KRRKRGSNSE FVDVHEQSSV SSGLAPMSYG GDGGGAHGLV PMWQVGATGA AGPFFMFPNN  240
GAMNPNQPQL WAVPAADAAT PIFNFQARPI SNFLSAFQPG VHVVGGDVQL QASSGSLSSG  300
ATSADMMSSN MHSLKWVLLD LIDRCSGFSC FKQIHAQIVT SGLACNDLVA NNVVGFLGKN  360
VNSVDYACDF LKQVDWRVSS FPFNKLISGY ANGDKPGAAV LVYRRILRDG FVPDLYTVPA  420
VLKSCVKFLG KGEGRQVHGV VVKMGFQCDV YAQNSLVHFY SVCGDCGGAI RVFDEMPVKD  480
VVSWTGLISG HVKAGLFDEA ISLFFRMDVK PNVATFVSVL VACGRMGYLR VGKGIHGLIF  540
KRSLGIEPDK IILASVLSAC ASLGALDYGR WVHEYIDRRG IKWDIHIGTS LIDMYAKCGC  600
IKMALQTFNE LPCGNVSTWN ALLGGLAMNG NGHEALQNFE EMTKAGTRPN AVTFLAILTA  660
CCHSGLVDEG RGYFYQMISQ PYNLSPRLEH YGCMVDLLCR AGLVDEAWEL INTMPMQPDV  720
LIWGALLSAY KAKGDVELSQ EILDRLLQLK LHDSGVYVLL SNIYATNERW ADVTRVRRLM  780
KKKGIQKSPG SSVIEVDGKA HEFLVGDTSH PQHEDIHVLL NILANQVYLE GIFPIHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	2e-58	TCP family protein