PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g318380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 170aa    MW: 17773.8 Da    PI: 4.7974
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g318380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.6e-162877155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      + y+G+r  +++g+Wv+eIr+p++   ++r++lg++  +e+Aa+a++ a+ +l+g
  Pd.00g318380.m01 28 PVYRGIR--SRSGKWVSEIREPRK---TTRIWLGTYAKPEMAAAAYDVAAIALKG 77
                      68****6..678*********843...5***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MDGEGGVVLT AEPGPSGAST SSSPRGHPVY RGIRSRSGKW VSEIREPRKT TRIWLGTYAK  60
PEMAAAAYDV AAIALKGPDT ALNFPNSILT YPIPASSAAS DIRAAAARAA QSRAEMISAG  120
EGGERSEPEA LLNMPNLLVD MAEGMLVSPP RISSEDSPGN SDGGENLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-36ERF family protein