PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g316600.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 385aa MW: 41850 Da PI: 4.7106

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g316600.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.6e-13	119	169	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r++h +Er+RR+++N+ ++ Lr+l+P + k+ + a+i +v+YI++Lq Pd.00g316600.m01 119 RMSHITVERNRRKQMNDHLSVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 169 99************************9...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MDDHDRPSSD FFQEQEQCYY SDTTCNLATP GDDLFSILES LDDGFGFGGA MEFPPPPATV 60 ALDNEQPPQP LVFSSSSADQ TELDETNSPP KTKRLKLSAS PASGGTATTF SDEDGQQTRM 120 SHITVERNRR KQMNDHLSVL RSLMPCFYVK RGDQASIIGG VVDYINELQQ VLQSLEAKKQ 180 RKAYSEVLSS PMLASSPRPP GPSPPVLSPR KPPLSPRLSL PPISPRTPQP TSPYKPSSAR 240 ALRQPPPQLP AAANIISNYL ISSPNMPTSS SFELPSPSSS TTSSHINNNN NIDNLNELFA 300 NSKSAVAQVE VKFSGPNVLL KTVSPPIPGQ ALRIISTLEE LSLEILDVSI TTVDETMINA 360 FTIKIGIECQ LSAEELAHQI QQTFC

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MDDHDRPSSD FFQEQEQCYY SDTTCNLATP GDDLFSILES LDDGFGFGGA MEFPPPPATV  60
ALDNEQPPQP LVFSSSSADQ TELDETNSPP KTKRLKLSAS PASGGTATTF SDEDGQQTRM  120
SHITVERNRR KQMNDHLSVL RSLMPCFYVK RGDQASIIGG VVDYINELQQ VLQSLEAKKQ  180
RKAYSEVLSS PMLASSPRPP GPSPPVLSPR KPPLSPRLSL PPISPRTPQP TSPYKPSSAR  240
ALRQPPPQLP AAANIISNYL ISSPNMPTSS SFELPSPSSS TTSSHINNNN NIDNLNELFA  300
NSKSAVAQVE VKFSGPNVLL KTVSPPIPGQ ALRIISTLEE LSLEILDVSI TTVDETMINA  360
FTIKIGIECQ LSAEELAHQI QQTFC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	130	RMSHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53210.1	1e-49	bHLH family protein