PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g316590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 328aa MW: 35589.6 Da PI: 4.8918 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.2 | 9e-10 | 131 | 152 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDg++WrKYGqK++ g+++pr Pd.00g316590.m01 131 LDDGFSWRKYGQKDILGAKYPR 152 59*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MHGEKMSLIN ELAQGRELAR QLQIHLNAPS SSHGTRESLV QKIIVSYEKA LSMLNSSSSA 60 SGGEQQLPTG HAAIRMIESP PPSLNGSPLS EDSDREFKDQ DNKDSSRKRK TLPRWTQQIR 120 VTSGMGLEGP LDDGFSWRKY GQKDILGAKY PRLLILAEAI TDALIGMLNA VWPQSKCNAP 180 MRTQQSSKLL TEEGTHNSMD IVDPQQNQQQ PQDLLLAIPQ GLTVVTEGLD AGDQELFPYN 240 PLNHNYVGHF SPPFMGPATS GTQCFSASEQ GFGGGSQSFQ GVECEIAEIL SSSNSATNSP 300 AALGFPFGQA DQNLYPNFSF DGPGFFSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 106 | 111 | SRKRKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 2e-21 | WRKY family protein |