PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g316590.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 328aa    MW: 35589.6 Da    PI: 4.8918
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g316590.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.29e-10131152122
                       ---SS-EEEEEEE--TT-SS-E CS
              WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                       ldDg++WrKYGqK++ g+++pr
  Pd.00g316590.m01 131 LDDGFSWRKYGQKDILGAKYPR 152
                       59*******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MHGEKMSLIN ELAQGRELAR QLQIHLNAPS SSHGTRESLV QKIIVSYEKA LSMLNSSSSA  60
SGGEQQLPTG HAAIRMIESP PPSLNGSPLS EDSDREFKDQ DNKDSSRKRK TLPRWTQQIR  120
VTSGMGLEGP LDDGFSWRKY GQKDILGAKY PRLLILAEAI TDALIGMLNA VWPQSKCNAP  180
MRTQQSSKLL TEEGTHNSMD IVDPQQNQQQ PQDLLLAIPQ GLTVVTEGLD AGDQELFPYN  240
PLNHNYVGHF SPPFMGPATS GTQCFSASEQ GFGGGSQSFQ GVECEIAEIL SSSNSATNSP  300
AALGFPFGQA DQNLYPNFSF DGPGFFSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106111SRKRKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-21WRKY family protein