PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g315740.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRF | ||||||||
Protein Properties | Length: 540aa MW: 58902.6 Da PI: 7.1191 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.3 | 1.5e-24 | 158 | 201 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrC+RtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e Pd.00g315740.m01 158 DPEPGRCKRTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKHVE 201 79****************************************98 PP | |||||||
2 | QLQ | 53.9 | 5.5e-19 | 98 | 130 | 2 | 34 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT++Q+ +L++Q+++yKy++a++PvP +Ll++ Pd.00g315740.m01 98 PFTNTQWKELERQAMIYKYMVASLPVPRDLLFP 130 8******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 540 aa Download sequence |
MMMMVHHDNH RRPFSSSERG EADGPTCNRP PVTDNYPNNN SVYDVVVATA AGSSSSGGQV 60 LRGLQPFDIS NRTTNTSISA HHTAFRSPGG MTTSLGFPFT NTQWKELERQ AMIYKYMVAS 120 LPVPRDLLFP STRAPSGPTI SQSPLSSGFN LRLSNSTDPE PGRCKRTDGK KWRCSRDVAP 180 DQKYCERHMH RGRPRSRKHV EVHANTTTKR VRHDINQAPP TMSPATVSIS NTTSINKNVC 240 QTQFIESTLQ PYHQSPMFLN RDTVKAATFD SMKSASSDRE PRSLDWLMMK GEPVQMATSD 300 PQWQHLMQSK TELNSKIPFF DANSSIFTQR SEEECFLNLN SYTNFNAGGE DQPDNECNMF 360 LNPDVVSLDN PLLEETPRCF IDAWSKTVMD EDTMDNSSAP STGQLSPSSL TLSMGGYNSI 420 NEEMGQTQMS LGNNGNGMKP GLSTWLSPAS WVASAPGGPL AEVLKPTTSA ASNPSSPITA 480 ATANGELGSP LATTVSSPSG ILQKTFASLS DSSGNSSPTL ASSRAKQPEI VSVWLNQNKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53660.1 | 2e-37 | GRF family protein |