PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g315100.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 583aa MW: 66589.3 Da PI: 8.1564 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.1 | 2.3e-14 | 5 | 51 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 +WT+eEd+ll ++++q+G g W++++ gRt++++k++w+ + Pd.00g315100.m01 5 PWTKEEDQLLRKCIEQYGEGKWHRVPLLAArlPGRTGNDVKNYWNCH 51 7**********************9976666666***********977 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 583 aa Download sequence |
MGGIPWTKEE DQLLRKCIEQ YGEGKWHRVP LLAARLPGRT GNDVKNYWNC HLSKKLNAQE 60 AEDKNKHCAR NVQVMRPRAS NYASTNSKRP YSTALDQAPS NNFCQPVNLL AQEGGSSSRT 120 QIPTPMPMPM LCNIGDGQNQ MFQAEHDESN KNVPSVEEED INDGINMACL YKFGVSARFI 180 MAYIPPHKRH SKETERPLPT PELLAPQFKK KLDLRSSKSN ADLDGKVIYA NHARSRWCII 240 GLDDENQFPS SVNLEPISWE TTERRIGEKP LALINTSLDK GSEVKWYFPK SPWVSIAENV 300 LEDLLSSFEN VKNDMKCPKL EQVKPSLVAR VGKVLFQRSP SVNMESIRNN LDTEILKQWK 360 RLFYTNLPVS YKENILKKVV PNIGVDFEEE KDVYQVKLSD STRPDSILSC KCSVMKEHGK 420 LQLHKIELNQ LRDMVIDISC PNKNLDLRVM LSTKRPVTAL SDDEMQSIRD LISSAVLDPD 480 VKGGLRWPLG KESSGDRYKV VGIWHVIANM YTNPSLRLKV RHADRFDFRT STGEATWEVS 540 LMLKKVLSKL QEEKVEVSSI SEILEENMRM IWDNFLCSEH FLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 2e-17 | MYB family protein |