PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g315000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 352aa    MW: 38262.9 Da    PI: 8.03
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g315000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.17.8e-173685255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       ++GVr++  +g+WvAeIr+p   + r +r +lg+f t  eAa a+++a+ kl+g
  Pd.00g315000.m01 36 NFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSTEAALAYDEAAGKLYG 85
                      69****999.**********8...3.35**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MEKEGRKLGK KATASMGRSR KGCMKGKGGP ENALCNFRGV RQRTWGKWVA EIREPNRGAR  60
LWLGTFNTST EAALAYDEAA GKLYGTSAKL NLPDHKPPSS SPANSSCSST KSTSDQYNMK  120
GGFGESMEGG SSGDGCGKLG GEACSDSLIF AELVGSRTMA NRNEFVQCPV GKFDGKGNFQ  180
HWRSQMELFF KVMEYTDVVI NGFNDPGLLS ACASRRAEAR AFFVFGDSLV DNGNNDYLAT  240
TARADSYPYG IDYPTHRPTG RFSNGLNIPD IISEQLGSEP TLPYLSPQLT GQNLLVGANF  300
ASAGIGILND TGIQFLNIIR IYKQLEYFEQ YQTRVAALND QHLAADDLKA VM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.18e-44ERF family protein