PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g314660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 458aa MW: 51515.7 Da PI: 4.9145

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g314660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.7	1.1e-32	231	285	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWt+eLHe+Fveav+qL Gse+AtPk il+lmkv+gLt++hvkSHLQkYR+ Pd.00g314660.m01 231 KPRMRWTQELHEAFVEAVNQLDGSERATPKGILNLMKVEGLTIYHVKSHLQKYRT 285 79****************************************************8 PP
2	Myb_DNA-binding	52.6	1e-16	233	284	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+ql g t+k I + m +g+t +++ks++qky+ Pd.00g314660.m01 233 RMRWTQELHEAFVEAVNQLDGSeraTPKGILNLMKvEGLTIYHVKSHLQKYR 284 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MSNFGSSKAM SSSFPNLSTP LDDQYSRLPD SFQVSSQREK TRYSKLPQSS SPGHLFSSSS 60 RPNDVHFSSV SPCERRSQNS PFIFKLPVDE KSLSLTHSSH SEVQPTALIN YSEENKDISW 120 YPDSLQEFLH FPENVPDQNG LVDSSTGVIT SEDHAEKTDW SDWDPLISFD DALDPNWELS 180 IDVDAVDPKP KVLNPHSDIL VQPPQIQQHQ PVQSEEFRPT PEPLSTAPPT KPRMRWTQEL 240 HEAFVEAVNQ LDGSERATPK GILNLMKVEG LTIYHVKSHL QKYRTARYKP ESSEGACEKV 300 STPVEETNSL DLKASMGITE ALRLQVELQK RLHEQLENQR KLQLQIEEQG KYLEKMFEQQ 360 RNMEDSRVKA VSSTVDDHAT PPSNLVCPSP GEDKPETSKH DHEKTPISAS STSTPLEEGS 420 QDANRKKQKA QETESQEEPD HPGDVESGTQ PTKRARNG

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MSNFGSSKAM SSSFPNLSTP LDDQYSRLPD SFQVSSQREK TRYSKLPQSS SPGHLFSSSS  60
RPNDVHFSSV SPCERRSQNS PFIFKLPVDE KSLSLTHSSH SEVQPTALIN YSEENKDISW  120
YPDSLQEFLH FPENVPDQNG LVDSSTGVIT SEDHAEKTDW SDWDPLISFD DALDPNWELS  180
IDVDAVDPKP KVLNPHSDIL VQPPQIQQHQ PVQSEEFRPT PEPLSTAPPT KPRMRWTQEL  240
HEAFVEAVNQ LDGSERATPK GILNLMKVEG LTIYHVKSHL QKYRTARYKP ESSEGACEKV  300
STPVEETNSL DLKASMGITE ALRLQVELQK RLHEQLENQR KLQLQIEEQG KYLEKMFEQQ  360
RNMEDSRVKA VSSTVDDHAT PPSNLVCPSP GEDKPETSKH DHEKTPISAS STSTPLEEGS  420
QDANRKKQKA QETESQEEPD HPGDVESGTQ PTKRARNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	8e-85	G2-like family protein